Gene Apre_0344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0344 
Symbol 
ID8397118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp388964 
End bp389998 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content35% 
IMG OID644994702 
Producthypothetical protein 
Protein accessionYP_003152114 
Protein GI257065858 
COG category[S] Function unknown 
COG ID[COG2855] Predicted membrane protein 
TIGRFAM ID[TIGR00698] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAAAT CTATAGAAAA AAATATAAAA GGGATTATTC TTTGCCTTAT AATTGCAATA 
ATATCGCAGA TAATCGGCAA AAGAATCCCA CTAGTAGGCC CAGCAGTCTT TGGTATTCTA
ATTGGAATGG CCCTAGGTCA AATTATAAAA GACAAAAAAC CTTATATTGG TGGTGTGAGA
TTTACATCAA AGAAAATCCT TCAATATGCT GTAATCCTCC TTGGGTTTGG TCTTGATCTT
GGAATTGTTT TAAAAACTGG TAAACAATCA CTTCCAATCA TCCTATCTAC CATATCAACA
TCACTTATAA TCGCATACCT AGCCTATAGG ACTGGGCTAA TAAAAGGAAA TATTGCAACT
CTTGTTGGTG TTGGATCATC AATTTGTGGA GGCTCTGCAA TTGCAGCTGC CGCTCCAGTT
ATAGATGCAG ATGAAGATGA GATAGCCCAA GCCATATCTG TCATATTCTT TTTTAATATC
TTAGCCGCTA TTTTATTTCC AAGCCTAGGT CGTATGATTG GATTTTCTAC TACCGATGGT
CATGCCTTTG GTATATTTGC AGGATCTGCT GTTAATGATA CATCATCAGT TACAGCATGC
GCATCAACAT GGGATACAAT GTATAATCTA GGTAGCCAGA CACTTGATAA GGCTGTAACA
GTAAAATTAA CTAGAACCCT AGCTATAATT CCAATATGCT TAGGACTAGC CTTCATTAGG
ATGAGAAACG CTGATCAAGA AGATAACAAA AAAATTTCTA TAATACAAAT TTTCCCATTC
TTTATAATCT ACTTCATCCT TGCAAGTTTG ATTACAACCA TAGCCCTAGC CAAAGGAGTA
AATATTGAAT TTTTCAAACC CTTTAAGGAC TTATCCAAAT TTTTTATTGT AATGGCAATG
TCAGCTATTG GTTTTAATAG TGATATAGTA AAACTATTAA AATCAGGAGC TAAGCCACTA
GCCTTAGGAG GAATGTGCTT TATATCAATC ACATCCATAA CCCTAATACT AGAAAAAGTT
CTAGGCATCT TATAA
 
Protein sequence
MIKSIEKNIK GIILCLIIAI ISQIIGKRIP LVGPAVFGIL IGMALGQIIK DKKPYIGGVR 
FTSKKILQYA VILLGFGLDL GIVLKTGKQS LPIILSTIST SLIIAYLAYR TGLIKGNIAT
LVGVGSSICG GSAIAAAAPV IDADEDEIAQ AISVIFFFNI LAAILFPSLG RMIGFSTTDG
HAFGIFAGSA VNDTSSVTAC ASTWDTMYNL GSQTLDKAVT VKLTRTLAII PICLGLAFIR
MRNADQEDNK KISIIQIFPF FIIYFILASL ITTIALAKGV NIEFFKPFKD LSKFFIVMAM
SAIGFNSDIV KLLKSGAKPL ALGGMCFISI TSITLILEKV LGIL