Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_0239 |
Symbol | |
ID | 8397013 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | + |
Start bp | 271735 |
End bp | 272601 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 644994600 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003152012 |
Protein GI | 257065756 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAAGT TTTTAAATAA ACATTGGGGT TGGACCTTTT TAATCATACC TTTGATATTA CAAGCCATAT TTTTCTATTT TCCAATGTTA CAGGGAGCCT TTTATAGTTT TACCAACTGG ACAGGCCTTA CCTATAACTT TGATTTCGTA GGAATAAATA ACTATTCAAT CCTTATGACT GATGAGAAGT TCTTCAAGGC CTTAGGCTTT ACCTTGATAT TAACTATATG CCTTATAGTT GGAGAAATAG TATTTGGTAT ATTAATAGCT AGAGCCCTAA ATTCAAAAAT CAAGGGAAAA ACATTTTTTA GAGCCTGGTT CTTCTTCCCA GCTGTCCTAT CAGGATTAAC CGTATCTTTG ATTTTTAAAC AAATCTTTAA CTACGGACTT CCAGCCATAG GAGAATCTTT AAATATAGAA TTCCTAAAGA CTAGTCTTTT GGGAACGACT TATGGTTCTA TCTTCGCTGC TATATTTGTA ATGCTCTGGC AGGGAGTTGC TATGCCAATT ATAATTTTCC TATCAGGCCT ACAGACAATT CCTACAGAGA TAAAAGAAGC AGCTGCCATT GATGGAGCAA CTAGCAGACA GACATTTTGG AGTATAGAAC TACCTTACCT CTTGCCAAGC ATATCTATGG TCTTTATCAT GGCCCTTAAG GCAGGGCTTA CAGCCTTTGA TCAAATCTTT GCCCTTACAG GGGGTGGTCC TAGCAATTCC ACAACCTCTA TAGGACTTTT GGTTTATAAC TATGCCTTTA AGAGCAATCA ATACGGCTAT GCCAATGCCA TAGCTCTGAT ACTATTTTTG CTTATAGCCA TAGTTTCTAT TGTTCAGATT AAGATATCAA AACGTTACGA AGTATGA
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Protein sequence | MRKFLNKHWG WTFLIIPLIL QAIFFYFPML QGAFYSFTNW TGLTYNFDFV GINNYSILMT DEKFFKALGF TLILTICLIV GEIVFGILIA RALNSKIKGK TFFRAWFFFP AVLSGLTVSL IFKQIFNYGL PAIGESLNIE FLKTSLLGTT YGSIFAAIFV MLWQGVAMPI IIFLSGLQTI PTEIKEAAAI DGATSRQTFW SIELPYLLPS ISMVFIMALK AGLTAFDQIF ALTGGGPSNS TTSIGLLVYN YAFKSNQYGY ANAIALILFL LIAIVSIVQI KISKRYEV
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