Gene Apre_0229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0229 
Symbol 
ID8397003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp261776 
End bp262930 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content41% 
IMG OID644994590 
ProductMalate dehydrogenase (oxaloacetate- decarboxylating) 
Protein accessionYP_003152002 
Protein GI257065746 
COG category[C] Energy production and conversion 
COG ID[COG0281] Malic enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGTAT ATGAAAAAGC TTTAGAAAAA CATGAGAAAT GGCAGGGAAA AGTTGCAACA 
GAAGTGAAGG CCAGAGTTAA TAATGCAGAA GATTTGACCT ATGCCTACAC ACCAGGAGTT
GCTGAACCTT GTAGGAAAAT CGCCGAAGAT AAGAAGAAGG CCTACACCTA CACATCAAAG
GCCAACACAA TAGCAGTAGT AAGCGATGGG TCTGCTGTTC TAGGACTTGG TAATATTGGT
CCTGAGGCTG CCATGCCTGT TATGGAGGGA AAGGCTGTTT TGTTTAAGGA GTTTGGCGAT
GTAAATGCTG TGCCTATCGT CCTTGACACT CAAGATGCTG ATGAGATAAT TAATGTCGTA
AAAAACATAG CTCCAGGCTT TGGCGGAATC AATCTCGAAG ATATATCATC TCCAAGATGC
GTCTACATAG AAGAAAAACT TAAAAAAGAG CTCGATATAC CAGTCTTCCA CGACGACCAA
CATGGAACTG CAATTGTAAC TCTTGCAGCC CTTATTAATG CCCTTAAGAT CGTAGGAAAG
AATAAGGAAG ATATCAAGGT CGTAATTTCC GGAGCGGGAG CTGCTGGTTT TTCAATAGCT
AAGCTTTTAA GAGATTATGG AGTAGGTCAT ATTATAGTTT GTGACTCTAG GGGATCTATC
AACAAAGACC ATCTAGAAGG AGACAATCCT GTTAAGGCAA GAATTGCCGA ATTTACCAAT
GAGGAAAACT TTAAGGGAAG CTTAAAGGAA GCTATGGTGG ATTCTGACGT TTTTGTAGGA
GTATCTGCTC CAAATATTAT AGATGGAGAA GATATAAAGA ATATGAATAA AGACGCTATT
GTCTTTGCTA TGGCAAATCC GGTTCCAGAA ATCGACTATG ACGAGGCCAA AAAAGCTGGT
GCGAGAATTC TTGCGACAGG TAGGAGCGAT TATCCAAACC AAATCAACAA TGTCCTAGCC
TTTCCTGGAA TATTTAAGGG AGCCTTGAAG GCCCATGCTT CAGCCATAAC AGATGAGATG
AAGCTTGCTG CGGCAAATGC CTTAGCCCAA ATGGTTGATG AGGATAAGTT AAATGAAGAA
TACATCATAC CAGGAGCTTT TGAGGAAAAT GTAGCTGATA AGGTGGCCCA GGCTGTGATG
GATTATGTTA AATAG
 
Protein sequence
MNVYEKALEK HEKWQGKVAT EVKARVNNAE DLTYAYTPGV AEPCRKIAED KKKAYTYTSK 
ANTIAVVSDG SAVLGLGNIG PEAAMPVMEG KAVLFKEFGD VNAVPIVLDT QDADEIINVV
KNIAPGFGGI NLEDISSPRC VYIEEKLKKE LDIPVFHDDQ HGTAIVTLAA LINALKIVGK
NKEDIKVVIS GAGAAGFSIA KLLRDYGVGH IIVCDSRGSI NKDHLEGDNP VKARIAEFTN
EENFKGSLKE AMVDSDVFVG VSAPNIIDGE DIKNMNKDAI VFAMANPVPE IDYDEAKKAG
ARILATGRSD YPNQINNVLA FPGIFKGALK AHASAITDEM KLAAANALAQ MVDEDKLNEE
YIIPGAFEEN VADKVAQAVM DYVK