Gene Apre_0176 details

Gene Information

• Locus tag: Apre_0176
• ID: 8396927
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Anaerococcus prevotii DSM 20548
• Kingdom: Bacteria
• Replicon accession: NC_013171
• Strand: +
• Start bp: 203966
• End bp: 204442
• Gene Length: 477 bp
• Protein Length: 158 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 644994514
• Product: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• Protein accession: YP_003151949
• Protein GI: 257065693
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• TIGRFAM ID: [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 0.940943
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGAATAG GAATTGGATA TGATGTTCAC AAACTAGTTG AGGGAAGGGA CCTATACCTA 
GGAGGGCTCA AGGTTGATTA CGAGCTCGGG CTTTTGGGTC ATTCAGATGC AGATGTACTA 
ACTCATGCTA TAATGGATGC CATCCTAGGA GCTCTTGCTA AGCCTGATAT AGGAAATTTA 
TTTCCAGATA CAGATCCTCT CTATAAGGAT ATATATTCTA TAGATCTTTT AGATAAGGTA 
GTGGCCCTTA TGGAAGAAGA AGGCTACAAA ATTGGAAATC TCGATACTGT AACAATTTGC 
GAGAGGCCTA AAATTGCCCC AATTAGGGAA GACATCAGAA AAATTTTGGC AAAACATTTA 
AAAACAGATA TAGAAAATAT TAGCGTCAAG GCTTCAACAA GCGAAAAGCT CGGCTTTACC 
GGCAGGGGCG AGGGAATTGA AGCGCGCGCA GTAGTTCTTT TAGAAAGAAG GAAATAA 

 

Protein sequence

MRIGIGYDVH KLVEGRDLYL GGLKVDYELG LLGHSDADVL THAIMDAILG ALAKPDIGNL 
FPDTDPLYKD IYSIDLLDKV VALMEEEGYK IGNLDTVTIC ERPKIAPIRE DIRKILAKHL 
KTDIENISVK ASTSEKLGFT GRGEGIEARA VVLLERRK