Gene Apre_0154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0154 
Symbol 
ID8396905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp183896 
End bp184759 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content42% 
IMG OID644994492 
ProductROK family protein 
Protein accessionYP_003151927 
Protein GI257065671 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACGGAT CTATTGAATT GGGCGGAACC AAGATTAGGT GCGCCATTTT AGATGAAATC 
GGAAATATTG TCAAAGAAAT TAGGGTAGAG ACCAAGGACC CTGAGGAAAA TATGAAGGAT
GTGGTGGATT TTCTTAAGAA AAATCCTGTA GAAAGCATTG GAATCGGAGC CTTCGGACCA
ATCGATGTGG ACAAGGAGTC AAAGACTTAC GGCTTTGTCC TAGAAACTCC AAAGAAGCTT
TGGAGAAACT TTGACCTTCT AGGATCTATC AAGAAAGAAC TCAACCTACC TATGGGCTTT
ACTACAGATG TTGGAGCTAG TGGAATTGGT GAATATAGGT ATGGAGCTAG CAAGGATAAG
AGATCTTCCC TCTACCTAAC TATAGGAACT GGAGTCGGCG GATCTTATAT CCAAGATGGG
ACCTTACTTC AAGGATTTTC TCATCCTGAG ATGGGACACA TTGAGATTGC TAGGGAAGAA
GGAGATGAGG TAGAAAGCTT CTGCGACTTC CACGATTCTT GCTTTGAAGG ACTTTGTGCA
GGACCTGCCC TTGAACTTAG GACTGGACAA AGGGGAGAGA ATCTCGATAA GGATGACCCA
GCCTTTGATA TCCTCGCCAA ATATATAGCC AAGGGCCTTA TGACCTACAC CATGATCCTA
AGACCTCATA TCATAATAAT TGGAGGCGGA GTAGCCAATA AGGAAGGGAT GATTGAAAAA
ATCAGAAGAG AATTTGAAAA ATTAGATAAT CACTATATAG ATATTCCTAA TGCGGATGAA
TATATAGTCT TTCCTGAGCT TGGCAACGAA GCAGGACTAA TCGGAGGATA TGTACTTGCC
AAGGAAGCCT TAAAGGAAGA ATAA
 
Protein sequence
MYGSIELGGT KIRCAILDEI GNIVKEIRVE TKDPEENMKD VVDFLKKNPV ESIGIGAFGP 
IDVDKESKTY GFVLETPKKL WRNFDLLGSI KKELNLPMGF TTDVGASGIG EYRYGASKDK
RSSLYLTIGT GVGGSYIQDG TLLQGFSHPE MGHIEIAREE GDEVESFCDF HDSCFEGLCA
GPALELRTGQ RGENLDKDDP AFDILAKYIA KGLMTYTMIL RPHIIIIGGG VANKEGMIEK
IRREFEKLDN HYIDIPNADE YIVFPELGNE AGLIGGYVLA KEALKEE