Gene Apre_0139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0139 
Symbol 
ID8396890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp165280 
End bp166146 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content40% 
IMG OID644994477 
Productpeptidase S11 D-alanyl-D-alanine carboxypeptidase 1 
Protein accessionYP_003151912 
Protein GI257065656 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1686] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.231194 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGAAAA AATATATAAT TTTACTAGGC CTTTGCCTAA TTTTTCTCAT AGGAGGCTTG 
AATTTTGTTA AAAGGGATTC GAAGTTTGAC CTAGAGGATT CTAAAAGCAA GGCTGTTTAC
ATATATAATC TTACAGATGA TAAAAAAGTC TACGGAAAAA ATGAAAATAA GCCTCTCCCC
ATGGCATCTC TAACTAAAAT CATGACCCTT CTTGTAAGTC TCGACCATGT TTCTAACCTA
GGAGAGCTTG CACCAATTGA CTATGATTCC TATATGAGGG CTGTCAGTGA AAATGCCTCT
ATGGCGGGCT TTCTTGCAAA TGAGACAACG ACCTACCGAG ACCTCATGTA TGGGACAATA
CTAGCATCTG GAGCAGAAGC AGCAGATTCC CTTGCAATCA ATGTGGCAGG AAGCATAGAT
TCGTTTGTAG ATCTTATGAA TGAAAAAGTA GGAGAGCTTA ATCTAGAAAA TACCTCCTAC
GCCAATGCCG ATGGGATGGA TGATAGGAGA AACTTCCAGT CGGCTAAAGA TTGTGCTATG
CTTATCAAAT ATGGCCTAGA AGATGGTAAT TTCAGGGCAA TTTTCACTAA GAGAGACTAC
CTATCTCAAG CGACAAATGA ACATCCAGAC GGAGTCTACA TAGAAAGTAC AATATTTTCT
CATCTTAAGG ATTATGAAGA AAATGGATTT GAGATTATTG GAGGCAAGAG TGGAACTACA
GACGAGGCTG GACTCTGCTG GGCGACCCTT GCCGAAAAAG ATGGGAAGGA ATATATAATA
GTTGTCATGG GAGTTTCTTT TTCAGATATT GATGACCTTC CAGATGCCCA TATCAGAGAG
ACCCTAGAAT ATTTAGAGAG AATCTAA
 
Protein sequence
MKKKYIILLG LCLIFLIGGL NFVKRDSKFD LEDSKSKAVY IYNLTDDKKV YGKNENKPLP 
MASLTKIMTL LVSLDHVSNL GELAPIDYDS YMRAVSENAS MAGFLANETT TYRDLMYGTI
LASGAEAADS LAINVAGSID SFVDLMNEKV GELNLENTSY ANADGMDDRR NFQSAKDCAM
LIKYGLEDGN FRAIFTKRDY LSQATNEHPD GVYIESTIFS HLKDYEENGF EIIGGKSGTT
DEAGLCWATL AEKDGKEYII VVMGVSFSDI DDLPDAHIRE TLEYLERI