| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1365 |
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| Symbol | |
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| ID | 8414256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1541541 |
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| End bp | 1542125 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 645022968 |
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| Product | single-stranded nucleic acid binding R3H domain protein |
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| Protein accession | YP_003180380 |
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| Protein GI | 257785163 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1847] Predicted RNA-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.856474 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGGATG AGACTTTCGT TTCTGAGCCA AACGCTCTTA ATGAGTCTCC TGTCGTTGAT
TCACAAGACG AGTTTGCTTC AATTCGAGAG CATTTTGAAG CCGGAATTCA GCTTACTGAT
GTTGAGATGA ATAAGATTGC TGATACAGCT GTCTTTTATC TGAGAGAGCT TCTCTCATTC
TTTGGCGAGA ATAGCTGTGC AATTGATGAG TATGACGGTG AAGACGGTGA GCTCATTCTT
GACGTAACTG GTGGCGATCT TGCAATTCTT ATTGGTCGTC ACGGCAACAC GCTTGAGGCA
CTTCAGATGG TTCTTTCTTC TCTGATGAGT GCTAAGCTTC ACTTTCACTA TCCAGTGTCT
GTTGATGTTG AAAGCTATAA GAGCCGTCGT CGCAATAAGC TTCAAGAGAT GGCGCTCTCT
GCTGCTGCTC GCGCTAAAAA GACCGGTAAG GTTTCTCTTG CTCCAATGAG TGGCTATGAG
CGTCGTATTA TCCATATTGC ACTTAGAGAT AACCTTGAGG TTACTACTCA CTCTGAGGGT
GATGATCCAT ATCGACGTGT TGTGGTTACA GCTATCAATA GCTAA
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| Protein sequence | MEDETFVSEP NALNESPVVD SQDEFASIRE HFEAGIQLTD VEMNKIADTA VFYLRELLSF
FGENSCAIDE YDGEDGELIL DVTGGDLAIL IGRHGNTLEA LQMVLSSLMS AKLHFHYPVS
VDVESYKSRR RNKLQEMALS AAARAKKTGK VSLAPMSGYE RRIIHIALRD NLEVTTHSEG
DDPYRRVVVT AINS
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