| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1308 |
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| Symbol | |
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| ID | 8414192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1473218 |
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| End bp | 1473868 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 645022904 |
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| Product | Sua5/YciO/YrdC/YwlC family protein |
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| Protein accession | YP_003180323 |
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| Protein GI | 257785106 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0009] Putative translation factor (SUA5) |
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| TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.283902 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGAGAGT ACATCAAAGT TGACCAGATG AGTCCAGATG CATCTGTAGT TTCTTTAGCA
GTTGAGGTTG CTCGTCGTGG CGGTGTACTT ATTATGCCTA CTGATTCTGT CTACGGGATT
GGTGCAGCAG CAACTCCTCA AAACCCAGGA CATAAGCGTA TTTTTGAGAT TAAGCAACGT
CCCGTAGAGC AGACACTTCC ATGGCTTGTG GGCAGTAAGT CTGACTTGCA AAAATATGCT
CATATTACAC ATGACTGGGC AAATAAGCTG GTAGAAGCAT ATTGGCCAGG AGCTCTTACG
TTAGTGGTTA ACGCATCAGA GAACGTTCCT GAAGAGTATG TTTTACCGGA TAATCGGACC
ATTGCGCTTC GTATGCCCAA TTCACCACTT GTGTGCCGGA TTGCACAGCA GCTCGGATGT
CCTTTGGCTA CTACCAGCGC CAATACGCAC GGAACTCCTT CTGCAGTTGA TGGATGTGGT
CTTGAGGCGG AGCTTGTTGA AGAGGCTGAT TTGGTACTTG ACGGAGGTCC AGCGCCCCTT
GCTATTGCGT CGACCATTGT TGATTGTACA GGTAATGAGC TGCGCATTTT GCGCGAAGGC
GCTCTTCCAA CCGAGGATAT TCTCGCCACC GCGGAATTTG CGGAAAGATA A
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| Protein sequence | MGEYIKVDQM SPDASVVSLA VEVARRGGVL IMPTDSVYGI GAAATPQNPG HKRIFEIKQR
PVEQTLPWLV GSKSDLQKYA HITHDWANKL VEAYWPGALT LVVNASENVP EEYVLPDNRT
IALRMPNSPL VCRIAQQLGC PLATTSANTH GTPSAVDGCG LEAELVEEAD LVLDGGPAPL
AIASTIVDCT GNELRILREG ALPTEDILAT AEFAER
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