| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1306 |
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| Symbol | |
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| ID | 8414190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1471897 |
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| End bp | 1472541 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 645022902 |
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| Product | uracil phosphoribosyltransferase |
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| Protein accession | YP_003180321 |
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| Protein GI | 257785104 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0035] Uracil phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01091] uracil phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.12178 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.272748 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAGATT ACGATGAGTC CAGACTTACG GTTGTTGACC ACCCATTGGT TCAGCACAAG
CTTCACATTC TTCGTGATAA GACAACTACT ACAAAGCAGT TCCGTGAGCT TGTTAACGAA
CTTGCAATTC TTGAGAGCTA TGAGGCTATG CGTGATTTCC CACTTGAGGA CGTCCAGGTA
GAGACTCCTC TTGAGACCAT GACTGCTAAG CGTATCGCTG GTAAGAAGGT TGCGATTATT
CCAATTCTTC GTGCTGGTCT TGGTATGGTT GACGGCATTT TAGAGCTGGT TCCCTCTGCT
CGTGTTGGTC ATGTTGGTAT GTATCGCGAT CCAGAGACCC ATCTTCCTCA CCAGTATTAC
TGCAAGTTCC CTGCAGATAT TGAGAACCGT ACTTGCCTGG TTGTTGACCC AATGTTGGCA
ACTGGCGGTT CCCTAACTGC TGCTATTCAG TTCCTGCGTG AAGCTGGTGT CAAGGATATC
CGTTGCTTGA CCATTGTTTC TTGCCCTGAA GGTGTCAAAG CAACTTTGGA CTTTGACCCA
GATGTACGCC TCTACACTTG CACTGTTGAT CGTCAGCTGA GTCCAAATGC TTACATTCTT
CCAGGTCTCG GTGATGCAGG TGACCGTATT TATGGCACCA AGTAA
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| Protein sequence | MADYDESRLT VVDHPLVQHK LHILRDKTTT TKQFRELVNE LAILESYEAM RDFPLEDVQV
ETPLETMTAK RIAGKKVAII PILRAGLGMV DGILELVPSA RVGHVGMYRD PETHLPHQYY
CKFPADIENR TCLVVDPMLA TGGSLTAAIQ FLREAGVKDI RCLTIVSCPE GVKATLDFDP
DVRLYTCTVD RQLSPNAYIL PGLGDAGDRI YGTK
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