| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1282 |
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| Symbol | |
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| ID | 8414162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1440442 |
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| End bp | 1441050 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 645022874 |
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| Product | sugar isomerase (SIS) |
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| Protein accession | YP_003180297 |
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| Protein GI | 257785080 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.418782 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAGCTG AAAAAGAGCA GGTTCAGGAG TTTCTTTCCA TTGTGGGAAA GTCACTCCAT
CAGTATGTAG AGAACATTGA TTTTGAAGCA CTTTCCGCAG CTAAAAAGCT TATTTTAGAC
GCAGAGGCAA AGGGTGGTCG TCTGCATGTA ACTGGCATTG GTAAGCCAGG TCACGTTTCC
GGTTATGCTG CATCGCTTTT CTCGTCAACT GGAACTCCAA CCTATGAGCT TCACGGTACC
GAATGCGTTC ACGGATCTGC TGGTCAGACT CGTCCTGGTG ATGTGGTTAT TGCTATCTCT
AACTCCGGCG AGACGGGCGA GCTTAAGGCT ACGGTTACCT GTCTGAAGAA TGTTGGCGTG
CACATTATTG CGTTGACCGG CAATCCCAAT TCCTGGCTGG CAAATGAGGC AGAGGTTGCT
CTCATTGCAG GTGTTGAGCA GGAGGGCGAC TCCATGAACA AACCTCCACG CGCATCAATC
TTGGCTGAGA TTATGGAGCT TCAGTGCCTT TCTATTCTGC TTCAGAACGA GTACGGCCTT
AATCCAGAGC AGTACGTTAA GTGGCATCCC GGTGGAGCTC TTGGCGCATC TATTCGTGAG
GGCAAATAA
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| Protein sequence | MAAEKEQVQE FLSIVGKSLH QYVENIDFEA LSAAKKLILD AEAKGGRLHV TGIGKPGHVS
GYAASLFSST GTPTYELHGT ECVHGSAGQT RPGDVVIAIS NSGETGELKA TVTCLKNVGV
HIIALTGNPN SWLANEAEVA LIAGVEQEGD SMNKPPRASI LAEIMELQCL SILLQNEYGL
NPEQYVKWHP GGALGASIRE GK
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