| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1230 |
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| Symbol | |
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| ID | 8414109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 1380812 |
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| End bp | 1383085 |
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| Gene Length | 2274 bp |
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| Protein Length | 757 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 645022823 |
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| Product | sodium/hydrogen exchanger |
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| Protein accession | YP_003180247 |
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| Protein GI | 257785030 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0025] NhaP-type Na+/H+ and K+/H+ antiporters |
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| TIGRFAM ID | [TIGR00831] Na+/H+ antiporter, bacterial form |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.503131 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGAGACAT TTGAATTTGT GCTCATCGTT TTGACGTGCG TCGCAGCTTC CTCGGTCATC
GACAAGTTTG TCAACGTCTC CATCCCGGTA ATACAGGTGG TCATAGGCCT ATTGGTGGCA
CTCGTTTTAC CCAGCGTCCA AGAAGTGCAT CTGGAATCTG AGCTCTTTAT GCTGGTCTTT
ATTGCTCCGC TCCTCTTCAA CGAGACGAGA GAAACCAACA TCCGTGCGCT TCTCCTCAAC
TTGAACAGTA TTTTGTCATT GGCAATTGCA CTAGTGATTG TCAGTGTTCT CTCGGTCGGC
TACGCCCTCC ATCTGATGGT TCCCTCAATC CCCCTAGCTG CAGCTTTTGC ACTTGCTTCA
GCGCTTGGAC CAACGGATGC AGCCACCGTT ACCGCACTTA AATCAAACAT TCATCTAACC
CATCGCCAGC AGACGCTTCT CTCCGGAGAA TCCCTCATTA ACGACGCATC CGGCGTTGTT
GCATTTCAAT TCTCCGTTGC AGCAGCTGTT ACGGGTACGT TTTCGCTGAT AGACGCAGCG
GGATCATTCA CGGTGCTTTT TGTAGGCGGC GTGGCAGTGG GAATTGTCAC AGGCTTTGCT
TTCTCTGCCA TCAACGCAAT GCTTGGCAGA TTGGGCTATG AGGACACTGT TGCAAACGTC
CTCTACGAAG TACTCACGCC ATTTCTTGTC TATCTTCTTG CCGAAACCTT CCACGTTTCT
GGCGTACTGG CCGTTGTAGC AGCGGGCTTG ATAATTGCAC TTCCTCGCAG ACAACATAAT
AAAGCGATGG TAGCAAGACA AAAACTGGTA TCTGATTCCA CATGGAAGGT CATAAGCTTC
CTCATCAACG GCACCATCTT TGTCTTCCTG GGAATGCAGC TTCCACTTGC CGTACTTCCT
GGTACTAACG GCGGCCTCAA TATCCTGCAA ATTCTAGGTA TTGTTGCTGC AATTACCCTG
TTTATGCATG CCGTCCGCTT TGCATGGCTC TACGCGCTGG AAACTCACAA GCTCCACAAG
GGTGGTCACC TCTGCACTGG TAAAGATAAC GAGAAAGACG ATGGCGAGAA ACCCGTCGAG
CAGCTCGCTG AACTGAATGC TAATCAAAGT GCTGAGCAAC CCCTCAACCA GTCCAAAGCC
GCGTGTATTC CAAAGCCTAT CTCTATCACA TCTGCCGAGC TCATTAAAAA CGTACTGGTC
ACTACCATTG CGGGTGCAAA AGGCGCGGTA ACGTTGTCGA TCATCCTCAC CTTGCCGCTG
GCAACTCAGT CCGGAGCAGC GTTTCCACAG AGGGATCTGT TAATCACCAT TGCCGCCGGC
GTTATTCTCG CCACATTGTT CTTGGCAGAC AACCTATTAC CTGTGTTGTC CAAGTCTCCG
GAAGCTGACT CTGACCTACC TGAACGCCTC CACAAAGGAG AGATTGCCGT TTTGGAAGCA
ACTCTTGCCG AACTCAGGAG CATGCTACAG TCAGAAAACC CTATGTCAAA GTATCTACCT
GCGCTTCGTT TGACTATCAC GCGTTATACC AACCGCCTGT TTGCTTCTCG TATTACCGCG
CCCGACTCAG GCAAACTGAT GAAAGAAGTA ATACTTCACG AGACAGAAGT ACAGCGGAAA
TGTCTTGAGG AGCTTCGCAA GCGTCACGTT AAGACCAACA ACCCCATTCC ATGGGACCAA
ATTGTCGATG ATATTACTTC AATTCGCAGG TCAGTTGGTT ATTACGGACC TATTGCAAAC
ATTGCTGCAA AGACAAACCA CCGCTCACGG TTTGCCGTTG CTCTCCACGA GCTTAAGCTG
TCAGCACAAC GCATCATTGA TGGCGGTATT AGACATCTAG AGGATGCTGA CCAGTCCTAC
TACCAGGCAT GTCTATACGC GCTTGAGATG GAATACGCAG GGCTCGACGA CCTAGAGCGC
ATTGCAAACG GCGACGATGA AGAGATGGCG GTCATTGCAT CAAACTTGAT GATTGACCAC
GAGTCGGCAA TTGAGTCCAT TTGGAGCCGC ATCAATATCA ACGATGAGCA CGGCTCTAGT
ACTACTCAAG TTTCTTACCT TCTACCTTAC AATCTGAGCT CACATAAGAT GTCACCGCAT
TTTAGGCAGC AGATTGCCAA TGCTCGCGAG TACGCCGATG ATGTGGCAGA AAACGCACTG
CGCATTGAGT TGGACCAGAT CTCGCGCCTT CAGTCTGAGG GCGTCATTGA CCGCGAAGTT
GCCGCCCACC TACGCGAAAA CGTCTACTAC CTGCAGATGA CTTTGAGTGA GTAG
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| Protein sequence | METFEFVLIV LTCVAASSVI DKFVNVSIPV IQVVIGLLVA LVLPSVQEVH LESELFMLVF
IAPLLFNETR ETNIRALLLN LNSILSLAIA LVIVSVLSVG YALHLMVPSI PLAAAFALAS
ALGPTDAATV TALKSNIHLT HRQQTLLSGE SLINDASGVV AFQFSVAAAV TGTFSLIDAA
GSFTVLFVGG VAVGIVTGFA FSAINAMLGR LGYEDTVANV LYEVLTPFLV YLLAETFHVS
GVLAVVAAGL IIALPRRQHN KAMVARQKLV SDSTWKVISF LINGTIFVFL GMQLPLAVLP
GTNGGLNILQ ILGIVAAITL FMHAVRFAWL YALETHKLHK GGHLCTGKDN EKDDGEKPVE
QLAELNANQS AEQPLNQSKA ACIPKPISIT SAELIKNVLV TTIAGAKGAV TLSIILTLPL
ATQSGAAFPQ RDLLITIAAG VILATLFLAD NLLPVLSKSP EADSDLPERL HKGEIAVLEA
TLAELRSMLQ SENPMSKYLP ALRLTITRYT NRLFASRITA PDSGKLMKEV ILHETEVQRK
CLEELRKRHV KTNNPIPWDQ IVDDITSIRR SVGYYGPIAN IAAKTNHRSR FAVALHELKL
SAQRIIDGGI RHLEDADQSY YQACLYALEM EYAGLDDLER IANGDDEEMA VIASNLMIDH
ESAIESIWSR ININDEHGSS TTQVSYLLPY NLSSHKMSPH FRQQIANARE YADDVAENAL
RIELDQISRL QSEGVIDREV AAHLRENVYY LQMTLSE
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