| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1121 |
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| Symbol | |
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| ID | 8413994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1269863 |
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| End bp | 1270747 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 645022710 |
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| Product | degV family protein |
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| Protein accession | YP_003180140 |
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| Protein GI | 257784923 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1307] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00762] EDD domain protein, DegV family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGATT ATGTTGTAAC TTGTTGTTCA ACTGCTGATG TAAGTGAGCA GTATCTTCAA
TCACGTAACG TACACTATGT ATGTTTTAAC TATGAGCTTG GTGGTCAGCA GTGTAAGGAT
GATTTTGGCC GTACCAATAC TCCAGCACAG CTTTATAGTC GCATGCTTTC GGGCGAGGAA
TGCCGTACTT CACAAGTTGC TATTGGTGAA TACATGGATT TTTGGCGACC TCTATTAGCG
TCTGGTCACG ATGTGTTACA CGTTTCATTA AGTTCGGGTA TTTCTGGAAC GTACGAGTCA
GCCTGTCAGG CACAAAAAGA AATTAAAAAA GAATTTCCTG AAAGAAAAGT TGAAGTAGTT
GATTCGCTTC AAGCTTCATC TGGTTATGGG CTGTTGGTTG ATGCAGTTGC AGATAAACGA
GATGCAGGAA TGTCTTTTGA TGAGCTGGTT GCTTGGGCAC GTGAGGCACG TCATTATGTC
TATGCATGGT TTTTCTCGTC TGATTTAACC TTTTTTGTTC GTGGTGGCCG TATTTCAAAG
GCAGCAGGAT TACTTGGCGG TATGCTCAAC ATTTGTCCCA TTATGGATGT CGAGCCAGAT
GGTTCACTTG CCGTTAAAGA AAAACAACAC GGTAAGAAAA AGGCTGCCGC ACGCGTGGTG
GATATCATGG CCCAAACAGC TGAAGATGGT TTGAATTATT CTCGTAAGAT ATTTATTTCT
AATTCAGAAT GCCCAAAAGA TGCAGCTACG GTGCAAAAGC TTATTCAATC AAGGTTTCAT
CAGGTTAAAG AGATTGATAT GTTTGCTATT GGCGCAACTA TTGGTGTCCA TACTGGTCCT
GGAACTGTTG CAACGTTCTG GTGGGGAGAA GAACCTCGCG CTTAA
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| Protein sequence | MSDYVVTCCS TADVSEQYLQ SRNVHYVCFN YELGGQQCKD DFGRTNTPAQ LYSRMLSGEE
CRTSQVAIGE YMDFWRPLLA SGHDVLHVSL SSGISGTYES ACQAQKEIKK EFPERKVEVV
DSLQASSGYG LLVDAVADKR DAGMSFDELV AWAREARHYV YAWFFSSDLT FFVRGGRISK
AAGLLGGMLN ICPIMDVEPD GSLAVKEKQH GKKKAAARVV DIMAQTAEDG LNYSRKIFIS
NSECPKDAAT VQKLIQSRFH QVKEIDMFAI GATIGVHTGP GTVATFWWGE EPRA
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