| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1063 |
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| Symbol | |
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| ID | 8413936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1207127 |
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| End bp | 1207855 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 645022652 |
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| Product | transcriptional regulator, GntR family |
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| Protein accession | YP_003180082 |
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| Protein GI | 257784865 |
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| COG category | [K] Transcription |
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| COG ID | [COG2188] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.188898 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAGCTT TTATGGGAAG ACAGCCACTC TACGAGCAGC TTGCAAATAT GCTGCGTTAT
CGTATTGAGA ACGAGATGGA TCCAGACGAT CCGCTTCCTT CTGAGCGAGA GCTCTCCGAT
TCTTATGGTC TTTCTCGTAC CACGGTAAGA CTTGCCCTGC AAGAGCTCGA ACACATGGGG
CTTATTTACC GTCAACGCGG TCGCGGTACC TTTGTAGCTG ATATTTCTGA GCGTGCAACA
GATCTTATGG GCGGCTATAG TTTCACCGAT CAGCAGCGCC AGTTAGGCCG TGTTCCAAAA
ACTACCACTC TTGAGTTTGA CACTATTGAG GCTAATAAGT TCTTAGCCCA GCACATGCAT
GTTATTCTTG GCGAGAAACT CTTCCGCATC AAACGTCTGA GAAGTGCTGA TGATGTGCCC
ATGATGTTGG AAGTAACCTA CCTTCCAGTT TCACAGTTTT TCTCGCTTAC TGCTCATGAT
CTTGAGCAAA AATCCTTGTA CCAAATTTTT GAAGAAGACT ACAACATAAA GATTGGCGTG
GCAGAAGAGG AGTTCAAGGC TTCAATTGCT CGCTCGGATG ACGCCACTTT ATTGCAAATT
TCTGAGGGTT CGCCGGTGTT GAGTCTTACT CGCACCACGT ATAACGACAA AAATATCATT
GTTGAGTTCA CTTTGAGTGT AGCTCGCGCC GATCAATTTA GATACAAGAT TGTACATACG
CGCAGTTAG
|
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| Protein sequence | MTAFMGRQPL YEQLANMLRY RIENEMDPDD PLPSERELSD SYGLSRTTVR LALQELEHMG
LIYRQRGRGT FVADISERAT DLMGGYSFTD QQRQLGRVPK TTTLEFDTIE ANKFLAQHMH
VILGEKLFRI KRLRSADDVP MMLEVTYLPV SQFFSLTAHD LEQKSLYQIF EEDYNIKIGV
AEEEFKASIA RSDDATLLQI SEGSPVLSLT RTTYNDKNII VEFTLSVARA DQFRYKIVHT
RS
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