Gene Apar_1060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_1060 
Symbol 
ID8413933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp1204231 
End bp1204674 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content41% 
IMG OID645022649 
Producthypothetical protein 
Protein accessionYP_003180079 
Protein GI257784862 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.841693 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGTTTT ATTCGCATAA CTATTTGATT CATCATGCCG CCGCATTTGA CTGGACCCAG 
CTGGTTCTTT TTGGTTTTGT TGCGCTTCTG ATGATCTTCT CTCTTGTGCA TTACGTGCGT
GATAGAAAGA ATTCTAAATA TCGTGAGCTT GCGCTTATTG CGTTGTTCTC GTTTATTTTT
CTTGGACTTC TGCAGTTAGA TCGCGTGTTA GAGGTTAATC AAGCAAGTAA GCACTATGAG
TCAATTATTG CCTCACAAGA AAACATTGCT CGCCGTCTTG AGGTTGATTC TAACCACGTG
TATATTGCCT TCGACAATCA GGGAAATCCA TCGTATCTCG AGGTTGACGG CAAGTACTAT
CACGTTTTGA AAAATACCGA GAATGGCTAT GTTATTGAGC AAATAAACCT TGTTGGCAGT
GACATTAAGC ACGTAGAGGA GTAG
 
Protein sequence
MEFYSHNYLI HHAAAFDWTQ LVLFGFVALL MIFSLVHYVR DRKNSKYREL ALIALFSFIF 
LGLLQLDRVL EVNQASKHYE SIIASQENIA RRLEVDSNHV YIAFDNQGNP SYLEVDGKYY
HVLKNTENGY VIEQINLVGS DIKHVEE