| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1050 |
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| Symbol | |
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| ID | 8413923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1189929 |
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| End bp | 1192358 |
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| Gene Length | 2430 bp |
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| Protein Length | 809 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 645022639 |
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| Product | glycogen/starch/alpha-glucan phosphorylase |
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| Protein accession | YP_003180069 |
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| Protein GI | 257784852 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0058] Glucan phosphorylase |
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| TIGRFAM ID | [TIGR02093] glycogen/starch/alpha-glucan phosphorylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGTAA ATAACGGACA AAACATTTTT ACCGATAAAC AAGATTTTGA AGATCAGTAT
CGAGATAAGT TCATTCAGAT TCTTGGCAAA TATTATGGAG AATGCACTGA TCAGGAACGC
TATAACGTTC TTGCACGTCT CATTGCAGAA AAGGCGCGAG AAATTCAGTC AACTTCTTAT
ATTCATGCTA ACAAGCAGGT GTATTACTTC TCCCTTGAGT TTCTTCTTGG ACCTCTGCTT
GAGAATTACC TGCTTAATCT TGGTATCACT GACGTTGTTG CGGCGGGTCT TGAAGAGATG
GGAACATCTC TTCAGAAGCT TGCTGCTCAA GAAGTAGATC CTGGCCTTGG CAATGGAGGC
TTGGGACGAC TTGCTGCATG TTTCCTTGAT TCTATGGCAC ATGAAGGAAT GGCCGGCTTT
GGTAATGGTA TGAGATACCG TTACGGTCTT TTCCGTCAGG AGATTAAGGA TGGACGCCAG
GTTGAGTGTA CTGATAACTG GCTGGCAAAC GGATATCCAT GGGAAGTTAG AAAAGACGAT
TCCAGCGTAC TTGTGCGCTT TGGTGGCACG GTTGTAAGGC ATGAGGGCGA GAATGGCGAT
TTTTGGTTCT CACAAGAGGG CGGCCAGGTG GTAAAGGCTG TTCCATACGA TGTTCCTATT
GTTGGTTATG GTGCAAAGAC CGTAAATAAG TTGCGTCTCT GGTCTGCAGA ACCAGCAGAG
GAAGACTTTG ACCTTGATGC TTTTAACGCT GGTGATTATG CGCGTGCTAA TAAGTTCCGC
TCTGACGTGG AGGCAATCTC AACTATTCTG TATCCAAATG ACTCTGGTGA GCACGGACGT
ATCCTCCGTC TAAAGCAGGA GTATTTATTT GTTTCTGCTG GTCTCCAGTC CATTCTTCGT
GCCTACAAAG ACAAATATGG TGAGGATTGG GATCACTTTG CTGATCACGT TTGTATCCAC
ACTAACGATA CGCATCCAGC AATGTGCGGA CCGGAGCTCA TGCGTCTTCT TGTTGATGAG
CATGGCGTTG ACTTTAACGA AGCATTTGAT ATTGCAAGAA ATGCTATTTC TTATACTAAC
CACACCGTTA TGCCTGAAGC TCTTGAGAAA TGGCCTATTA ATACCTTCCG TGAGCTTCTT
CCTCGCTTGT ATATGTTTAT TGATGAGGTT GATCGTCGCT ATAAGGAGCA GTTGCTTGCT
GACTCTAACG GTAACACTGA TCTTCTCGCC TCAACAGCAG TACTGTGGGA CAACACTGTT
CGTATGGCTA ACCTTTCTAT TTTATTTAGT CACTCGGTTA ATGGTGTCTC TGACCTGCAT
ACAAACATTC TAAAGCAGAG TGTACTGAAG GATTTCTACA AGCTTCGTCC AGAAATTTTT
AATAATAAGA CCAATGGTAT CTGTCACCGT CGTTTCTTGG CACAAGCGAA TACCGCTTAC
GCGAAGCTTA TCACTGAAGC TATTGGCACT GGTTGGCTTG ATGATGCTAA TGAACTTAAC
AAGCTTTCTG CATTTGAGAA TGATGTTGAG TTCTTGGATG AGATGGATGC TGCAAAGAGA
GAAGAAAAAG AACGCCTTGC TGCATACGTC AAGAAGACAA CTGGTATTGA GATGGATACC
AATACCATTT TTGATACACA GGTAAAGCGT TTCCATGCGT ATAAACGCCA GCTGCTTAAC
ATCTTCAAGA TTTTGTATCT CTATAACCGT ATGCTTGATG ATCAAAGCTA TAAGCCAGCT
CCAACAACTT TTATTTTCTC GGGTAAAGCT GCTCAAAGCT ACACCTTTGC AAAAGAAGTT
ATTAGACTCA TTCACTCCGT TGCAGATGTT GTCAACAACG ATGAGCGTAT TGAAGGACGT
CTCAAGGTTG TCTTTATTCC AAACTTTGCT GTTTCAAATG CGCAGCTTAT CTATGCTGCA
TCTGATATTT CAGAGCAGAT TTCTGTTGCT GGTGCAGAGG CCTCTGGTAC CTCAAACATG
AAACTTATGA TGAATGCAGC TCTGACTCTT GGAACGTACG ACGGGTCTAA TATCGAGATA
TCCGAGCTTG CAGGACCAGA GAATATTAAG ATCTTTGGCC TTCGTGCAGA TGAGGTCCAG
CAGGTATATG CTTCCGGTAC CTATTTTGCT CAAAACCTAC TTAATCAGAA TCCAACTTTG
GCTCGCATTG TAAACATGCT GACCGATGGT TCTTTGGCTC GACTGTCCGG TAATTTTGAG
TCAATTCACG ATTATCTGCT GATCAATAAT GATCCTGACC TGGTACTTAT TGACTTTGAT
GCATATGTGA AGGCATGGGA AGAGCTTACT CAGTCCTATG CAGATCGTCG TAGCTGGAAT
GCTCGTGCGC TTCACAATAC TGCAAACTCT GGTTTCTTCT CTGCTGATAG AACCATTAGG
GAGTACATGG AAGATATTTG GCACGTGTAA
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| Protein sequence | MAVNNGQNIF TDKQDFEDQY RDKFIQILGK YYGECTDQER YNVLARLIAE KAREIQSTSY
IHANKQVYYF SLEFLLGPLL ENYLLNLGIT DVVAAGLEEM GTSLQKLAAQ EVDPGLGNGG
LGRLAACFLD SMAHEGMAGF GNGMRYRYGL FRQEIKDGRQ VECTDNWLAN GYPWEVRKDD
SSVLVRFGGT VVRHEGENGD FWFSQEGGQV VKAVPYDVPI VGYGAKTVNK LRLWSAEPAE
EDFDLDAFNA GDYARANKFR SDVEAISTIL YPNDSGEHGR ILRLKQEYLF VSAGLQSILR
AYKDKYGEDW DHFADHVCIH TNDTHPAMCG PELMRLLVDE HGVDFNEAFD IARNAISYTN
HTVMPEALEK WPINTFRELL PRLYMFIDEV DRRYKEQLLA DSNGNTDLLA STAVLWDNTV
RMANLSILFS HSVNGVSDLH TNILKQSVLK DFYKLRPEIF NNKTNGICHR RFLAQANTAY
AKLITEAIGT GWLDDANELN KLSAFENDVE FLDEMDAAKR EEKERLAAYV KKTTGIEMDT
NTIFDTQVKR FHAYKRQLLN IFKILYLYNR MLDDQSYKPA PTTFIFSGKA AQSYTFAKEV
IRLIHSVADV VNNDERIEGR LKVVFIPNFA VSNAQLIYAA SDISEQISVA GAEASGTSNM
KLMMNAALTL GTYDGSNIEI SELAGPENIK IFGLRADEVQ QVYASGTYFA QNLLNQNPTL
ARIVNMLTDG SLARLSGNFE SIHDYLLINN DPDLVLIDFD AYVKAWEELT QSYADRRSWN
ARALHNTANS GFFSADRTIR EYMEDIWHV
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