| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1047 |
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| Symbol | |
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| ID | 8413920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1186100 |
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| End bp | 1187599 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 645022636 |
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| Product | glycogen/starch synthase, ADP-glucose type |
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| Protein accession | YP_003180066 |
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| Protein GI | 257784849 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0297] Glycogen synthase |
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| TIGRFAM ID | [TIGR02095] glycogen/starch synthases, ADP-glucose type |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCAAG TCTCCAAGCG TCGCAAGCTT CGTGTTGTTT ATGCAACTTC TGAGGTAGCG
CCTTTTTCCA AGACGGGTGG CCTTGGAGAT GTCTCGGGTT CATTGCCACA AGCACTTAAA
AAAGTAGGAG CTAGAGTGGC GGTAATTTCG CCACTCTATA GCGCTATCAA GCCTGAATGG
CGAGAAAAGA TGAAGAAAGT CTGTGAGCTT CAGGTGCCCC TTTCGTGGCG TTTTGAGTAT
TGTGGGCTTT GGCATCTTGT TTATGAGGGC GTTGATTTTT ACTTTGTAGA TAACGAGTTG
TACTTTGCTC GTGATGGTCT CTATGGTTAT TTTGATGATG GAGAGCGCTA TGCGTTCTTC
TCTAAGGCTC TTTGTGAGCT TATTGCACAC GTTCCAGAGC TCTCCTGTGA CGTTTTACAC
TGTAATGACT GGCAAACTGC GCTAGCACCT GTATTTTTGC GTGAGCAGTA TCAGAGCGTC
CCTGAGGTTC AGAACGTTAA GACGGTTTTC TCCATTCATA ATGTTATGTT CCAAGGTCAG
TTTACTGACA AGATGCTGAG CGATGTTCTT GGCCTTGCTG ATATCCCAGC TGCAGTTGAT
CAGCTGAGGT GTGATGCAAG TTCTATCAAT TTCATGAAGG GTGCGCTTTG CTACTCTGAT
TATCTACTTA CCGTTAGCCC AACGTATGCC CACGAGCTAC AGACAGAACA CTTTGGAGAG
GGAAGAGACG ATATCTTCCG TCGCCGTCAG AACGTTCTGC GTGGTATTCT GAACGGCATT
GACATGGGTA CATGGTCTCC TGCAAGTGAT CCTTATATTC CACAGAACTT CTCGGCACGC
CATATGGAAG GTAAGGCTGA GTGTAAGCGT CAGCTGCAAG AGGAGCTGGG TCTTGAGGTG
GCTTCAGATG CGCCACTTGC GGTAATGGTT ACACGTTTGA CCAATCAGAA GGGTCTTGGT
CTGATTCGCT ATGCTATGGA TCGTCTTATT CGTGCAGGTA TTGAAATTGC CGTTCTAGGA
ACTGGCGACG CTGAACAAGA AGACGCCATG CGCTACTTTG ACGAGCATTA TAAGAATCGC
ATGGCGGCAC GTATTGAGTT TGATATTGCG CTTTCTCACC GTATGTACGC AGGTGCTGAT
ATGTTTTTAA TGCCATCAGA GTTTGAGCCT TGCGGTCTTT CTCAGATGAT TTCTATGCGT
TACGGCACAC TTCCTGTTGT TCGCGAGACG GGTGGTCTGG CAGACTCCGT CAAACCATAT
AATCAGTTTA CGGGCGAAGG AACCGGCTTT AGTTTTGCTA ATCAAAACGC AGACGAAATG
GCAGATATTA TTTTGTACGC TGCTGACGTA TACAAGAACG ATAAGCAATC GTGGACAAAT
CTTGTAAAAC AGGCGATGGC AGAGGACTTT AGTTGGCATA ATGCTGCAAA TGAATATCTT
GACGTGTATC ATTTACTACA TCCTGAGATT ATCAGGTATG TTCGTCGTCG AGATTGGTAA
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| Protein sequence | MSQVSKRRKL RVVYATSEVA PFSKTGGLGD VSGSLPQALK KVGARVAVIS PLYSAIKPEW
REKMKKVCEL QVPLSWRFEY CGLWHLVYEG VDFYFVDNEL YFARDGLYGY FDDGERYAFF
SKALCELIAH VPELSCDVLH CNDWQTALAP VFLREQYQSV PEVQNVKTVF SIHNVMFQGQ
FTDKMLSDVL GLADIPAAVD QLRCDASSIN FMKGALCYSD YLLTVSPTYA HELQTEHFGE
GRDDIFRRRQ NVLRGILNGI DMGTWSPASD PYIPQNFSAR HMEGKAECKR QLQEELGLEV
ASDAPLAVMV TRLTNQKGLG LIRYAMDRLI RAGIEIAVLG TGDAEQEDAM RYFDEHYKNR
MAARIEFDIA LSHRMYAGAD MFLMPSEFEP CGLSQMISMR YGTLPVVRET GGLADSVKPY
NQFTGEGTGF SFANQNADEM ADIILYAADV YKNDKQSWTN LVKQAMAEDF SWHNAANEYL
DVYHLLHPEI IRYVRRRDW
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