| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0999 |
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| Symbol | |
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| ID | 8413871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1127704 |
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| End bp | 1128954 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 645022588 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_003180019 |
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| Protein GI | 257784802 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTATTG ATACTTCTGC TGAACAGCTG AAAAAAAACT ACTTTTGGAA TACGCTTGGT
TCCTTGATGA ATGCCGCTTC AACCGTGCTT ATGTTGATGG TGGTCACACG TACCATGGGA
GCTGCTGCCG GTGGTATTTT CTCGCTTGCT TATGCTGTTG CACAGCAGCT TATGGTTATT
GGTCATTTTG AAATCAGAAC ATATCAAGTT ACCGATACAG AAGAAGTATT TTCGTTTGGT
GTATATCTTG CCGCACGAAT TATCACAACT GTCTTAATGA TTGCAGGAAT TATTATTTTT
ACCTTGCAAT CTCAGGGATT AAGCTATGAG GGAATACTGT ATGCTCTCAT TGCATCACTG
CGTTTATTTG ATGTTGTAGA GGACGTATTT CACGGCATGT TCCAGCAGCA TGGTCGTTTG
GATATTGCTG GTAGAGCGTT CTTTTATCGT GTACTTACAA CTGTTGTTGG CTTTGCAGTA
GGTGTGATTC TTACAAAGAA CCTGCTTATT GGTGCAGTTA TTTCTTTTGT TGCATCTTTA
GTGATTATGA TTGCGCTTGT TGTCCCTCCT ACAAAAAGGA TGGCAACACT TAAGCCTACC
TTCGATATTA AACAAATTAT AAAACTGCTG TTAACCACTG CTCCTTTGTT TGCTGGTTCA
TTTTTGCTGA CATACGTTGT TGGTGCACCC CGCTATGCAC TAGGTGGTTT GAGTGATCAA
GCGCTCCTTA CTTTCTTTAC AGCATTAGCT ATGCCAGCTA TGGTTATCAA TCTTTTAAGC
AACTTTGTTT TTAAGCCGCT ACTTACTCAG ATGGCTGAAT ATTGGAATAA TCATCAAGAT
AAACAGTTTG TAGGCTTGAT TCTTAAAGGC TTTGCGGTAG TTGCTTTAGC TACCGTTGTT
TCGATGGCCC TGGCTTGGCC GCTAGGAGCT CCGGCTCTTG GTCTTCTATA TGGTCTTAAT
TTTGAACCTT ATAAGCTAGA GCTCTTGACG CTACTCTTTG GCGGTTTACT TAATGCTCTA
ACAGTCATTT TGTACTATGC CGTAGTAACC ATGCGCAAGC AAGTTGCTGT GTTTGTAAGT
TACGCTGCAG GTGCAGGCTT TGCCGCGCTT ACGGGGGGAT GGTTTGTAAG CAACTTTGGC
ATTATGGGAG CGTGCGTGCT CTATGATAGT TCGCTTGCAA TTCTTGCGTT AGTATTTGGT
ATTTTCTGCT ACTTGGGATT TAAAGATCAA AAGAAAAAGT CCGCTGCGTA A
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| Protein sequence | MTIDTSAEQL KKNYFWNTLG SLMNAASTVL MLMVVTRTMG AAAGGIFSLA YAVAQQLMVI
GHFEIRTYQV TDTEEVFSFG VYLAARIITT VLMIAGIIIF TLQSQGLSYE GILYALIASL
RLFDVVEDVF HGMFQQHGRL DIAGRAFFYR VLTTVVGFAV GVILTKNLLI GAVISFVASL
VIMIALVVPP TKRMATLKPT FDIKQIIKLL LTTAPLFAGS FLLTYVVGAP RYALGGLSDQ
ALLTFFTALA MPAMVINLLS NFVFKPLLTQ MAEYWNNHQD KQFVGLILKG FAVVALATVV
SMALAWPLGA PALGLLYGLN FEPYKLELLT LLFGGLLNAL TVILYYAVVT MRKQVAVFVS
YAAGAGFAAL TGGWFVSNFG IMGACVLYDS SLAILALVFG IFCYLGFKDQ KKKSAA
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