| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0995 |
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| Symbol | |
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| ID | 8413867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1123190 |
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| End bp | 1125820 |
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| Gene Length | 2631 bp |
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| Protein Length | 876 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 645022584 |
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| Product | peptidase U32 |
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| Protein accession | YP_003180015 |
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| Protein GI | 257784798 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0826] Collagenase and related proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGAAC GTAATCGTCG TGAGCGAGAA TTTACAGCTC ACGAGTTAAA TCGCATGAAC
GAGCTGGAGT GGACGGAGGA AGCCTCTGAC TTAGAGTTTT CATCTCAACC GCTTCCTCGT
GCAACACAGA TGGAACTTCT CGCACCAGCG GGAGGACCTG CACCGTTTGC TGCTGCTTTG
GCTGGCGGTG CGGACGCTAT TTATTGCGGT TTGGGTAACA ACTTTAACGC GCGCCGTGGC
GCAGACAACT TTGATGACGA GTCTTTTGCA CGTGCTTGTA GGCAAGCTCA TCTGGCTGGC
GCTCGCGTGT ACGTCACTGT TAATGTTGTT GTTAAGTGGG ATGAAATGCA GCGCGTACTG
CGCCTGATTC GTCGTGCATG GATTCTTGGA GCAGATGCTT TTATCATCCA AGACTGGGGT
CTTATGGCTC AGGTTAGAAA GACTTGGCCA GAGATTGAAT GTCACGTATC AACGCAGGCA
AACATTCACG ATACGCGTGG TGTTTCTGCC TGTAAAAAGC TTGGTGTAGG ACGCGTTACC
CTGTCCAGAG AGCTTACTAA AGAAGAGATT TCTACTATTT CCAAGCTTGG TGTTGAACTA
GAGTGCTTTG GTCACGGCGC CTTGTGTTTC TGTTATTCGG GTATTTGCCA TATGTCATCC
ATGCGTGGAG ACCGTTCTGC TAACCGCGGA GCTTGTGCTC AGCCGTGTCG TCTTCCGTAT
GAGCTGCTCA ATTCTAAGCA CGAAGTTGTC TCGATGGGCG GCATTGATAG GCTGCTGTGT
CCTAAGGATT ATTGCACTAT TGATGACGTG CCGGACATGA TTGAGGCGGG CGTGGGCTCG
CTTAAGATTG AAGGTCGTAT GAAGGCGCCT GAGTACGTGT ACTCTGTTGT GTCTTCGTAT
CGCCAGGCAA TTGATGCTGC CGAGAAAGGC GTTGATAACC AGGCCGATGT GGCACGTCGC
CATCGTTTGC TTAAACGTTC GTTTAACCGC GGCTTGACTA ATGCATATCT GCACGGCACC
GCCGGCAACA AGATGATGAG CTACGAGCGC TCCAATAACC GCGGCGAGGT TGTAGGTGAG
GTTACTGGAG GACGTTCGCT TGAAGATGCT CTTGAGCGCA AGAGTGGCTT GAATGGTGGC
CGCGTTAAGC TGCGTCGCTA CAAGCAGGCT GACGTTGACC TTATTGCACA TGCGCCTATT
GGCAAGAATG ACCTGCTTGA GATTAGACCT TTAGATGAGC CTGACAAGTT CCTGACCGCT
CTTTGTCCTA CAGATGTTGA ACCTGGTCAG AAGGTCACCG TCCGCACTTC TCGCGTTATG
CAGACTGGTT CTACGGTGCG CATTATTCGC TCTGAGGCAG CACGTGTGGC AGCTGAGCAG
ATTTCTTCAC TGGAATATCC TCGCAAACGA GCTGTTGATG TGACTATTAT TGCTCGCATC
GGCCAGCCTT TTACCGTGGT GCTTACTACA ACAGATGGAG CGGCAAGTGC GTCTGCTGAA
GGCTTTGTGG TTGAGGAAGC TCGCACTAAG GCGGTAACTT CTGACGAGCT TATTGAGCAC
GTAGGACGTA TGGGGACCTC TCCATTTGAG GCAGTGAGTT TTGACGTACA GATGGATGAC
GCGTGTGGCA TGAGTTTTAG TGCTGTTCAC AAGGTTCGCG CCGCAGCATG TGAGCAGCTT
GAGGCTGCGC TTCTGGAGGA GTACCAGGAT CGTGAGTATA AGATTGCTCC GCTTTCACGC
CTTGCCTATC AAAAGGAGCG AGAAGCTCAG GATCAAGAGA AACTCTTTGT TTTTGACAAG
GCAGCTGCAA AAACAAATGC ATCGCAGGCA GAGATATGTG TTCTGGTTGA GACTCCTGAG
CAGGCACGCG TTGCACTCAA GGCGGGAGCA GATCGTCTGT ACGCAACAAC AGATGTACTT
ACAGACGCTT CGTGGCCAGA AGATCTTCTC GCCAAGATAG TGCCATGGCT TGACGAGGTG
TGCCGCGAGA TTGACCACAA TCGTTTGGAT CCGTACGTCG TATCTGGTAA GCCGATTGCC
GTAGGCAACA TCTCTGAGCT AGCGCTGGCC GTTGAGCGTG GAGCTGTCCC AGAGGTGCGT
GAGTGTATTC CAATCCACAA CGATTACGCT TTGCAGGCTC TTGCTGACAT GGATGCAGAA
GGCGTCTGGC TCAACTCAGA ACTTACCCTC CAAGAGATTT GTCACATGGC GAGAAACGCC
TCGATTCCTG TGGGCTATAT GGTTAGCGGC CGTATTCGTA CCATGACAAC TGAGCATTGT
ATTTTGATGT CTACGGGTAA GTGCATTCAC GATTGTGATG CCTGTCAGTT GCGCCTTGAG
GAGCATACGC TTAGGGGTAT TGATAATGAT TACATGCCCG TAAGAACTGA CAGACACGGT
CGCTCAAAGA TTTGGAGTCC TAAACTTTTT GATGGTGTGC CAGAAATCTC TGAGATGCTT
TCAGCCGGCG TGAAGCGTTT TATGGTGGAC GCAACACTTT TGAGTGTGGA GCAGACAAGA
GAGGCCACTT CTCGCGTAGC TGCAGCGATT GAGGCAACAG CGTCGAGTGC ATCATTGCCT
CCACGTCTCA AAGATGCTTC AGTTGGACAT CTTTTCTCGC CAATTGGATA G
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| Protein sequence | MNERNRRERE FTAHELNRMN ELEWTEEASD LEFSSQPLPR ATQMELLAPA GGPAPFAAAL
AGGADAIYCG LGNNFNARRG ADNFDDESFA RACRQAHLAG ARVYVTVNVV VKWDEMQRVL
RLIRRAWILG ADAFIIQDWG LMAQVRKTWP EIECHVSTQA NIHDTRGVSA CKKLGVGRVT
LSRELTKEEI STISKLGVEL ECFGHGALCF CYSGICHMSS MRGDRSANRG ACAQPCRLPY
ELLNSKHEVV SMGGIDRLLC PKDYCTIDDV PDMIEAGVGS LKIEGRMKAP EYVYSVVSSY
RQAIDAAEKG VDNQADVARR HRLLKRSFNR GLTNAYLHGT AGNKMMSYER SNNRGEVVGE
VTGGRSLEDA LERKSGLNGG RVKLRRYKQA DVDLIAHAPI GKNDLLEIRP LDEPDKFLTA
LCPTDVEPGQ KVTVRTSRVM QTGSTVRIIR SEAARVAAEQ ISSLEYPRKR AVDVTIIARI
GQPFTVVLTT TDGAASASAE GFVVEEARTK AVTSDELIEH VGRMGTSPFE AVSFDVQMDD
ACGMSFSAVH KVRAAACEQL EAALLEEYQD REYKIAPLSR LAYQKEREAQ DQEKLFVFDK
AAAKTNASQA EICVLVETPE QARVALKAGA DRLYATTDVL TDASWPEDLL AKIVPWLDEV
CREIDHNRLD PYVVSGKPIA VGNISELALA VERGAVPEVR ECIPIHNDYA LQALADMDAE
GVWLNSELTL QEICHMARNA SIPVGYMVSG RIRTMTTEHC ILMSTGKCIH DCDACQLRLE
EHTLRGIDND YMPVRTDRHG RSKIWSPKLF DGVPEISEML SAGVKRFMVD ATLLSVEQTR
EATSRVAAAI EATASSASLP PRLKDASVGH LFSPIG
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