| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0933 |
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| Symbol | |
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| ID | 8413804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1046002 |
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| End bp | 1048041 |
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| Gene Length | 2040 bp |
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| Protein Length | 679 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 645022521 |
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| Product | ABC transporter related |
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| Protein accession | YP_003179953 |
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| Protein GI | 257784736 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.311537 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTACAAA TTAGAAAAAA ACAAGTCGAG AAGCTCGAAG AAGCTGCAGC AAAGGGCTCA
ACCTTTGGTG GCTTTAAGAA GATGAAGACG GCTTCCAAGA TTGCTCTTGT CATTCTTGTC
TTTGTTGTTC TTGCTTCTGT CTTAGCAAAC GTTATTGCTC CACATGACCC ACTTGAGATT
TTCAACGCTC GTCAGGCTCC AGGTAATGGA TTCATTTTTG GTACTGACGA TAAGGGCCGC
GACATTCTTT CTCGTATGCT CCATGGTGGT CAATATTCAC TGGTCATTGG TTTTGGTGCT
ACGGGTATGG CACTGCTATG TGGCTCAATT ATTGGTGCAA TTGCAGCTGT TTCCAGAAAA
GCTGTTTCTG AGGTTATCAT GCGTGTGCTC GACATCATCA TGTCGTTCCC AGGCATTGCT
CTTGCAGCAG TCTTTGTTTC TATTCTGGGT AACAGCGTTC CTTCAATCAT TTTTGCCATT
GGCTTTATGT ATACGCCACA GATTGCACGT ATTGTTCGCG CAAATATCGT CAGCGAGTAC
GGCGAAGATT ACGTAAGAGC AACCATTGTT TCTGGTGCTC GTGCACCGTG GATTTTGTGG
AAACATGTTC TTCGCAACTG CATTGCTCCA ATCATGGTCT TTACCGTTAC GCTTGTTGCA
GACGCAATCA TCTTTGAGGC ATCTTTGACC TTCATTGGTG CAGGTATTGC AGAGCCAACT
CCTACATGGG GTAACATCCT TGCTGATGCT CGTGCCGGCG TTCTTGCTGG TCGTTGGTGG
CAGGCATTCT TCCCAGGCTT GGCCATTATG ATGACCTGCT TGGCACTGAA CATCCTCTCC
GAGGGTCTTA CTGACGCTAT GGCAGCAGCG CCTGGCGCTC CTGTTGATAC AGAGAACTCT
GACTCCAGGC GCGCAGATGA CATTCTTGCA TCTGATCCAG TTCGTGCATA TGCGGAGCAA
GCAGAGTCGC TGGAGCGCAG GCTTAATGCA CTCAAAGAGG TTGAGCTGTC CAGAACTGAT
AGGCGTAAGC CAGACTTTGA TGTAAAGCCA TTACTGAGCG TTAAGGATCT TTGCATTAGC
TTTGAGTCTC ACGGAGACGT TAAGGTTGTT GACCACGTAA GCTTTGATGT TCGCCCTGGT
CAGTGCATGG CGCTGGTTGG CGAGTCTGGC TGCGGCAAGT CTATTACCAC TAAGGTCATC
ATGGGTTTGA CTGATCCAAA AGAGACCATT ACTGGTGAGG TCCTCTACAA GGACCAAGAC
CTCCTGAAGC TTTCCAAAGA AGAGCACCGC AAGCTGCTTG GACATGAGCT TGCAATGGTG
TACCAGGACG CTTTGTCTTC CCTGAACCCA TCTATGCTTA TCTCTTCTCA GATGAAGCAG
CTTACCAGCA GGGGAGGTAC ACGTTCTGCA GAGGAGCTTC TGGAGCTTGT AGGTCTGGAT
CCAAAGCGTA CGCTTGAGTC CTATCCTCAT GAGCTTTCCG GTGGTCAGCG TCAGCGTGTT
CTGATTGCTA TGGCACTTAC CCGCGATCCT TCGCTGGTTA TCTGTGATGA GCCAACAACC
GCTTTGGACG TTACTGTACA GAAGCAGGTT ATCAAGCTCT TAAATGACCT CCAGCGTCGT
CTTGGTTTTG CAATGATTTT TGTTAGTCAT GACCTTGCAC TTGTTGCAGA GGTTGCTTCT
GAGATTACTG TTATGTATGC CGGTCAGGTT ATTGAGCAGG CGGCTACTAC TGAGCTTTTG
ACCAACCCTG TTCACGAGTA CACCCGTGGT CTTCTCGGCT CTGTTCTTTC TATTGAGGAA
GGCGCGCAGG ACGGTACCAG GCTTCACCAG GTACCAGGTT CTGTTCCTTC TCCAGAAGAC
TTTCCAACAG GCGATAGGTT TGCTCCTCGT TCAAGCCATC CAGATCTGGG TCTTGAGGTA
CATCCTGTTA TTAAGGAGAT TCCTGGTAGA CATCATCGTT TCTCCGAGCT GCCTGATGAG
TATTTGAAGG AGCATGGTCT TGTGCCTTAC CTTGAGCGTT CTCAAAAGGA GGTGAGGTAA
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| Protein sequence | MVQIRKKQVE KLEEAAAKGS TFGGFKKMKT ASKIALVILV FVVLASVLAN VIAPHDPLEI
FNARQAPGNG FIFGTDDKGR DILSRMLHGG QYSLVIGFGA TGMALLCGSI IGAIAAVSRK
AVSEVIMRVL DIIMSFPGIA LAAVFVSILG NSVPSIIFAI GFMYTPQIAR IVRANIVSEY
GEDYVRATIV SGARAPWILW KHVLRNCIAP IMVFTVTLVA DAIIFEASLT FIGAGIAEPT
PTWGNILADA RAGVLAGRWW QAFFPGLAIM MTCLALNILS EGLTDAMAAA PGAPVDTENS
DSRRADDILA SDPVRAYAEQ AESLERRLNA LKEVELSRTD RRKPDFDVKP LLSVKDLCIS
FESHGDVKVV DHVSFDVRPG QCMALVGESG CGKSITTKVI MGLTDPKETI TGEVLYKDQD
LLKLSKEEHR KLLGHELAMV YQDALSSLNP SMLISSQMKQ LTSRGGTRSA EELLELVGLD
PKRTLESYPH ELSGGQRQRV LIAMALTRDP SLVICDEPTT ALDVTVQKQV IKLLNDLQRR
LGFAMIFVSH DLALVAEVAS EITVMYAGQV IEQAATTELL TNPVHEYTRG LLGSVLSIEE
GAQDGTRLHQ VPGSVPSPED FPTGDRFAPR SSHPDLGLEV HPVIKEIPGR HHRFSELPDE
YLKEHGLVPY LERSQKEVR
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