| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0821 |
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| Symbol | |
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| ID | 8413686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 904154 |
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| End bp | 905809 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 645022403 |
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| Product | Monosaccharide-transporting ATPase |
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| Protein accession | YP_003179841 |
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| Protein GI | 257784624 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4211] ABC-type glucose/galactose transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00463034 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCAAAAA CAGGTGGATC TGTTCTGACG GCTGAGCAGG AAAAAGAGCT GCTAAAGCCT
ATTGATCAGA AGATTGGTTC CATTCAGGCT CAAATTGATG AGCTTCGCGC AAATGGTACC
AATAAAGTAA TTTCAACGTT GAGCGCTATT GAGTCTACAA AGCGCGATAA GTCCATTTCT
GCCGAAGAGC GTACCACGCT TATTGAGGGC TACAAAACTG AACTTGAGCT TGCAAAGAAG
GTTGAGTCCG AGAACAATGC TCAGGTCTCC AAGCTTATTG CAGAGGCAGA GGCTTACCTC
AAGGAACACT ACAAGAGCGA GTATCTAGAG CCCGTTAAGG CTAGCTGTGC TGTCGAGAAG
ACTCAGGCCA AGCAGAATTA TGAGGCTGCT CTTGATCGTC TTAAAAAGGA GCACGAAGAA
GCTGTCAGGA AGACTTCTGA CGCTCAGGAA ATCAAGGACG AGAAGTACGT TTACAAGAAC
CGTCAGTTTG ACGCTAAGGT CAACTATCAG AAAGATCTTC AGCGCATCAA AGATCGTGCT
CATAATGCAT TTAGTCATGA GTATCACCTC ATCGACCTTC TCAGGATGTC TAAGTTTACT
CCACTGGAGT CTCAGGCTCA GAAGTGGGAG AACTACAAGT ACACCTTCAA CACCCGTTCA
TTCCTGCTTC AGAACGGTCT GTACATTGTT ATTCTCCTGG TATTTATCGC CCTTTGTATT
ATTACTCCAG CAGTCAAGGG CACTCAGCTT TTGACATACT CCAATGTCAT TAACATTCTT
CAGCAGGCAT CTCCTCGAAT GTTCTTGGCT CTTGGTGTAG CTGGATTGAT TTTGCTTACC
GGAACTGACC TTTCTATTGG TCGTATGGTT GGTATGGGTA TGACCGCTTC AACCATTATC
ATGCATCAGG GTATCAATAC TGGTCAGGTC TTTGGTATCA CTTTTGATCT TACTGGTGTT
CCAATTCCTG TCAGAATCAT TATGGCTTTG GTCACTTGTA TTGTTCTGTG TACTTGCTTC
ACTAGTATTG CTGGTTTCTT TACCGCCAAG TTTAAGATGC ACCCATTCAT CTCGACCATG
GCTAATATGC TGATTATCTT TGGTATTGTT ACCTATGCAA CAAAGGGTGT TTCGTTTGGT
GCCATCGAGC CATCTATTCC AGATATGGTC ATTCCACGAA TTGGTAAATT CCCATCTATC
ATTTTGTGGG CAATTGCCGC TATCGCTATT GTTTGGTTCA TTTGGAACAA GACTACCTTT
GGTAAGAACC TCTACGCTGT AGGTGGAAAC CCTGAGGCAG CAGCTGTTTC TGGTATTTCA
GTCTTTAGAG TTATGGTTGG CGCTTTTGTC ATGGCTGGTA TTCTTTATGG ATTTGGTTCA
TGGCTCGAGT GCATGCGTAT GGTTGGCTCT GGTTCAGCAG CTTATGGTCA GGGCTGGGAT
ATGGACGCAA TCGCGGCCTG CGTTGTTGGC GGCGTTTCGT TTACGGGTGG TATTGGTAAG
ATCTCTGGTG TCACTACAGG TGTTCTTATC TTTACTGCAC TGACTTACGC TTTGACAATT
CTTGGTATTG ATACCAACCT TCAGTTTGTC TTCTCGGGCG TCATCATTCT GACTGCTGTC
ACCCTTGACT GCTTGAAGTA CGTTCAGAAG AAGTAG
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| Protein sequence | MPKTGGSVLT AEQEKELLKP IDQKIGSIQA QIDELRANGT NKVISTLSAI ESTKRDKSIS
AEERTTLIEG YKTELELAKK VESENNAQVS KLIAEAEAYL KEHYKSEYLE PVKASCAVEK
TQAKQNYEAA LDRLKKEHEE AVRKTSDAQE IKDEKYVYKN RQFDAKVNYQ KDLQRIKDRA
HNAFSHEYHL IDLLRMSKFT PLESQAQKWE NYKYTFNTRS FLLQNGLYIV ILLVFIALCI
ITPAVKGTQL LTYSNVINIL QQASPRMFLA LGVAGLILLT GTDLSIGRMV GMGMTASTII
MHQGINTGQV FGITFDLTGV PIPVRIIMAL VTCIVLCTCF TSIAGFFTAK FKMHPFISTM
ANMLIIFGIV TYATKGVSFG AIEPSIPDMV IPRIGKFPSI ILWAIAAIAI VWFIWNKTTF
GKNLYAVGGN PEAAAVSGIS VFRVMVGAFV MAGILYGFGS WLECMRMVGS GSAAYGQGWD
MDAIAACVVG GVSFTGGIGK ISGVTTGVLI FTALTYALTI LGIDTNLQFV FSGVIILTAV
TLDCLKYVQK K
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