| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0663 |
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| Symbol | |
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| ID | 8413523 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 738740 |
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| End bp | 740020 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 645022240 |
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| Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
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| Protein accession | YP_003179683 |
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| Protein GI | 257784466 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
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| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATTT CAATAACTCC TCATGATTTG TTTGGAACGG TAGAGGCCAT TTCTTCCAAA
TCATACGCTC ATCGCGCGCT CATCTGCGCT TCGTTAGCAA ACGGCACCAC TAACATTACA
TGTCCCTACA TCTCAGAGGA CATTCAAGTA ACTGTTGATT GTCTTAAAGC TTTGGGCACA
ACTATTGCTA GAACTAAACA GGGATTTAGA GTTGTCCCTG CAAAAGAGGC AAACCGTCCT
CAAAATATTC AGCTTAACTG CAAAGAATCT GGTACCACGT TCAGGTTTAT ACTCCCCCTT
CTTGGAGCGC TTAATATAAG TGCCACAATT TCTGCAGAAG GAAGACTCTT CTCAAGACCT
CTTGAACCTC TTATCTCAGA GCTCTCTTCC CATGGTATGT CTTTTACTTG GTTAGACGAA
AAATTCCTTG AGGTTTCTGG CCAGCTTGAT GGTGGTTCGT TTGAGATGCC GGGAAATATT
TCTTCCCAGT TTATTTCTGG ACTCTTGCTG TCATTACCCT TATTGAATAA ACCTTCAACT
ATCCAAATTA CAGGACCCAT TCAATCAAAA GACTATCTAG CTATTACTGA GCATGTTATG
ACAGACTTTG ACATTACTAC CCCGTTTGAA GTAAACAGTG CCACCTATAC CATTGAGGCT
CAACACTATG TCTGTCCAGG CGTTTATTCA ATTGAAGGAG ATTGGTCAAA TGCTGCTCCT
TGGCTTGTTG CGGGAGCCAT TGGTCAAGGT GTAGAGGTCA CAGGACTCTC CATGCAAAGT
ACCCAAGGAG ACAAAGCTAT TTTAGCCGCG CTCTCTCTTG TGGGCGCACG TGTTTCTCGC
CAGCAAAAAG GTGCTGCAAG CATGATGGAT CACTTAAGGC CATTTTCCAT CTCTATCTCT
GAAGTATGCG ACCTCGCTCC GGTACTTGCT GCGCTAGCAG CGTTTATCCC TGGAACAAGC
AAGCTCACTG ATATTCAGCG CCTGCGTCTT AAAGAGTCCA ATCGTGTTCA AAGTATCTGC
ACCACACTTA AAGCATTTGG TGTGACTGTT GAGCTCTCTG AAGATCAAAC GGAGCTTGTT
ATCACTGGAG GAAAACAGCC CACGAGCTGT ATCGTAGACT CATATAATGA TCATCGCATT
GTCATGATGT CCGCTATTTT GGCTTCGTAT GCAACTGGTC CTGTTGTCAT CACCCATGCC
GAGGCAATCA ATAAATCGTA TCCACTTTTC TTTGAGCACT TTAAGCAGCT TGGTGGCATC
TGTCACAGTA TGGAGTCATA A
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| Protein sequence | MDISITPHDL FGTVEAISSK SYAHRALICA SLANGTTNIT CPYISEDIQV TVDCLKALGT
TIARTKQGFR VVPAKEANRP QNIQLNCKES GTTFRFILPL LGALNISATI SAEGRLFSRP
LEPLISELSS HGMSFTWLDE KFLEVSGQLD GGSFEMPGNI SSQFISGLLL SLPLLNKPST
IQITGPIQSK DYLAITEHVM TDFDITTPFE VNSATYTIEA QHYVCPGVYS IEGDWSNAAP
WLVAGAIGQG VEVTGLSMQS TQGDKAILAA LSLVGARVSR QQKGAASMMD HLRPFSISIS
EVCDLAPVLA ALAAFIPGTS KLTDIQRLRL KESNRVQSIC TTLKAFGVTV ELSEDQTELV
ITGGKQPTSC IVDSYNDHRI VMMSAILASY ATGPVVITHA EAINKSYPLF FEHFKQLGGI
CHSMES
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