| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0662 |
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| Symbol | |
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| ID | 8413522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 737597 |
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| End bp | 738739 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 645022239 |
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| Product | chorismate synthase |
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| Protein accession | YP_003179682 |
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| Protein GI | 257784465 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0082] Chorismate synthase |
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| TIGRFAM ID | [TIGR00033] chorismate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGACCT CAACTTTTGG GACAACAGTA AAAGTATCTA TTTTTGGTGA GTCTCATGCT
CCAAAAATCG GCTGCACAAT TGAAGGTTTA CCTGCAGGGT TTACGGTTGA CTTGCATGAG
CTTAAGACAT TTCTTCAAAG AAGATCTCCG TCGCATCCGT GGGATACTCC GCGTAAAGAA
ATTGACAATC CGAAGTTCGT CTCTGGAATT TCAGCAAAGG GTATTCTGGA TGGTTTCCCA
CTCACAGCGG AGTTGCCTAA CAACAATGTT CGGCAAAAAG ATTACACAGC TACAAAGCTT
GTTCCACGTC CAGGACATGC CGATTTTTCT GCCTGGGCAA AATGGGGAAA CTCCTACAAA
CAAACGGGTG GAGGACATTT TTCTGCTCGC CTCACAGCCC CTCTCTGCAT TGCGGGAGGC
ATAGCGCTCC AGATTTTACA CGCTCAGGGC ATCACTATTG CAGCTCACGT GCTCAAAATA
AAGAACATAA ATGATACTCC TTTTAAGCTC ATAGACAACT CCGTTGAAGC CAATAAGCTG
CTTGCTCTCC AAATGAATCA GCTGCTACAA GCCGCTCCTC AAGAACTTCC TTTCCTCGAT
GCTCAGACTG GCGAGAAAAC CCGTGCACTC CTCACACAAC TGCGCTCCGA GAAAAATACT
GTTGGTGGCA TCATAGAGTG CGTAGCAACA GGAGTTCCTG CAGGCATTGG TTGCCCTCAT
TTTCAAGGAC TTGAAAATAC AATCTCCGCC GCAGTCTTTG GTGTTCCCGC TGTTAAAGCC
ATAGAATTTG GCAGCGGTAT GAACGTTGCA AATTTACTTG GCTCTGAAAA CAACGATGCC
TACGAGGTAC GCGACGGCTC TGTTGTACCA ACCACCAATC ACGCTGGAGG CATTCTGGGC
GGCATCTCAA CGGGCGCTCC CATCTGGTTC AGATGCGCAC TTAAGCCTAT ATCAAGCATT
GGGCTTTCTC AACATTCAGT TAACCTTCAA ACTATGGAAT CAGAGCAGCT TGTGGTCCAG
GGCAGACATG ACGTAACTGC AGTCTTACGT GCTGTGCCTT GCGTTGAGAG CGCGTTTGCA
CTAGCACTTC TCGACACTTT GTATTCCTGG CCCTCTGAGC AGAACGGATA TCACAATGAC
TAA
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| Protein sequence | MMTSTFGTTV KVSIFGESHA PKIGCTIEGL PAGFTVDLHE LKTFLQRRSP SHPWDTPRKE
IDNPKFVSGI SAKGILDGFP LTAELPNNNV RQKDYTATKL VPRPGHADFS AWAKWGNSYK
QTGGGHFSAR LTAPLCIAGG IALQILHAQG ITIAAHVLKI KNINDTPFKL IDNSVEANKL
LALQMNQLLQ AAPQELPFLD AQTGEKTRAL LTQLRSEKNT VGGIIECVAT GVPAGIGCPH
FQGLENTISA AVFGVPAVKA IEFGSGMNVA NLLGSENNDA YEVRDGSVVP TTNHAGGILG
GISTGAPIWF RCALKPISSI GLSQHSVNLQ TMESEQLVVQ GRHDVTAVLR AVPCVESAFA
LALLDTLYSW PSEQNGYHND
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