| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0614 |
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| Symbol | |
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| ID | 8413474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 689231 |
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| End bp | 690655 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 645022192 |
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| Product | trigger factor |
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| Protein accession | YP_003179635 |
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| Protein GI | 257784418 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
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| TIGRFAM ID | [TIGR00115] trigger factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000543621 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.981656 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGAACATCA CCGTTACCGC AGATAAGCCA GTTGACGAGA AACTCACCGT CAAGGTTACA
GTTCCTGCTG CAGAGGTAGA CGCTGCCATT AAGCAGGCTT ACAAGGACAT TGCAAACAAG
TATTCCTTCC AGGGTTTCCG CAAGGGTCGC GCACCTCGTC CTGTTATTGA TGGCATTGTT
GGCCGCGAGG CAGTTCTTGC TCAGGCAACC AATGATCTTC TCGGCGCAGC AGAGCCACAG
CTCCTTGAGG AGCTTGATCT TGTTCCAGTT GGTCGTGGTG ATTACAACCA GGATGCAGAC
CTTCCTGTTG AGGGTCAGGA TTACTCTTAT GAGGTAGTCT TTAACGTTCG TCCTGAGGCT
AAGCTTGACT CTTACGATGC ACCTGCAATT AACATGCCAC CAAATGAGGC AACTGAGGCA
GAGATTGATC ATCAGATTAA GCAACTTCTC TCTTATCAGG CTAAGTTTGA GAACACCAAG
GAGAAGCGCG CTGTTAAAGA GGGCGACACC ATTGGTGTAG ACATCAAGAA CATTGAGGGT
GCTGCTCACA TGGAGGGCGA GGACCGCGTT CTTACCCTTA ATGGCACCCA GGCTCCAAAG
GAGCTTGAGG AGGCACTCAT CGGCATGAAG CCAGGTGAGG AGAAAGAGGT TAAGTGGACT
CACAGCCATA CTCACGGCGA TGAGGTTCAC TCTCACGATT ACGATATCAA CGTCAAAGTT
GTTGCTCACA AGAAGTCCGT CACCCCAGAG TTGACTGACG AGCTTGCAAA GAACACCTTT
GGTTATGACA CTGTCGAGAA ACTCCGTGAG GCTGTTAAGT CTGAGATTGA GTCCGATAAG
AAGAACTCTC TTCCAACCCT TAAAGAGGAC CGCGTTGTTG AGGCAGTTGG TAAACGCCTT
CAGCTTGACG AGGTTCCAGA AGAGTACAAG AACGAGGTCT TCAACGAGAT TGCTCAGGAG
TTCCTGAATG GTCTTCAGCA GCAGGGTATG AGCCTTGATA TGTTCCTGTC TGCACGCGGT
ATTAAGACCG ACGATTTTAT TGCTGACCTT CGTGTTCAGG CAGAGGAGCG TGCTCGCCAG
TCCCTGTCTC TTGACGCAAT GGCTGCAGAG CTCAAACTTG AGGCAACTGA GGAGGATATC
CGCGCAGAGT TTGAGCGTGC TGGTGTTCCT AACGTTGAGA CTGCAATTGA GGAGTGGCGC
AAGGCTGGCC GTCTTCCTGC AATTCGTGAG TCCATTCGTC GTTCCAAGGC TCTTGATTGG
CTGCGTGACA ACGCAACCGT CACCATTGTC GACGAGATTG CTGAGGCTGC TAAGGAAGAG
AAAAAGGCAG AGAAGAAGCC TGCTAAGAAG ACTTCTGCCA AGAAGGCTCC TGCTAAGAAG
AAGGCAGCTA AGAAGAGCGA GGACGCTAAA AAGGACGCTG AGTAG
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| Protein sequence | MNITVTADKP VDEKLTVKVT VPAAEVDAAI KQAYKDIANK YSFQGFRKGR APRPVIDGIV
GREAVLAQAT NDLLGAAEPQ LLEELDLVPV GRGDYNQDAD LPVEGQDYSY EVVFNVRPEA
KLDSYDAPAI NMPPNEATEA EIDHQIKQLL SYQAKFENTK EKRAVKEGDT IGVDIKNIEG
AAHMEGEDRV LTLNGTQAPK ELEEALIGMK PGEEKEVKWT HSHTHGDEVH SHDYDINVKV
VAHKKSVTPE LTDELAKNTF GYDTVEKLRE AVKSEIESDK KNSLPTLKED RVVEAVGKRL
QLDEVPEEYK NEVFNEIAQE FLNGLQQQGM SLDMFLSARG IKTDDFIADL RVQAEERARQ
SLSLDAMAAE LKLEATEEDI RAEFERAGVP NVETAIEEWR KAGRLPAIRE SIRRSKALDW
LRDNATVTIV DEIAEAAKEE KKAEKKPAKK TSAKKAPAKK KAAKKSEDAK KDAE
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