Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0532 |
Symbol | |
ID | 8413386 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | + |
Start bp | 617114 |
End bp | 618496 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 645022105 |
Product | hypothetical protein |
Protein accession | YP_003179554 |
Protein GI | 257784337 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000254138 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGACAGAAG GTAGGAATCC GGCAGTAGTC GCCGGCCTGC TCAGTGGACT GGTTCTTGTA GCAGAGCCAG CGTCTGCGCA TGCCCTTACA ACTAATGTAA TTCGCCAAAC TCCACTTGGA GCAATTTTCA CAGGCATCGG TATCGTACTT GCTGCGGTTG CTGTCATTTC TGGTACTGCA TTCGTTGTTT CTCGTGTTGT AAATCGTGGC GAGAAAACCG ATGGGACAGG AGAAGAGGTT CAGTCAGGTA CGTCTTTCCA GAGTACAGAC GAGGTTACAT CTTCAAAGCA GATTCCAGCA GCATCAGACT TCTCGCCAGA GCAGAGCGTT GTGATTCCGC TGGATTCTTC AAGGCGCTCA ATTGCTGCAT ATAAGCCAAA GCACATGAGA GTTTCTCAGT GGGATATGAC TGGCTCTATC CGTGTTCAGT CTGCTAAGCC AGTTGTAAGA AAACCGCAGG TTGTAAGCGC AGATGCAGAA GGCGTTCTTC CAGTTCGCGC TAAGAAAGCA CCTGCACACT CTACAAACGA CTACGCGCAG ATTGCAGAGA ACTATACCAA GCTTATAAGT TGGCGTGAGC GCACTGTTGC TCGTGCAAAG GGCGCTGCTG CTGTACTTCT TGAGCGCCTA GGACAAGACC CTATGGATGG TCTGCCTATT ATCGAGCGCG CTGATGGAAC TGTTGGTGAT GTTGGCACTG CTTGGTGGAC TAAGGCCGTG GGCGAAGAGT CTATTACGCG CGATTTTGGC ATTGCTGAGA TTGGTGCTGA GGCTATTCCT GAAGACTTTA CCAATCATGC TGCGGATATT TCTAGTCGTA TCTCTTACGT TGATCAGGGA GTTTTCCCAG AGAAGCGCAC GATTGATGAG CTTGAACACA CTGATGATTG GGCGCTTGCG CTGGCTGCTA TGGATGAACA TTTAGCTCGC CATGATAATT TGCAGATGCG CAAGTATCAT CCAGTGCAGT TGCCAATTAT TGGTCAGGCT GCTGCTGAGG CGGAAGTTAC AAGTCCAGCG GAGTCGTCGG GTGCAAAACT CGCCGCATCT CACAAAGTTT CTACAGCTCA AGTACGTTCT TCTCGCGAGC CGAACTACGC TGGTGTTGTT GCGCAATCAA CCGCAATGCC GCTGGTAAAG GCGACAAACG ATACATCTTC GCATGTTCAG GACATCTTTG ACGCGGTTGA GCGCGAAATG GCAGCTGAGC TTCAGGCGGC TGACGAAAGG CCAACGCGTG AGTTGCTACG CCTTATTGAG GGTGGCACCA GCAAGATGAA GAAGATCTCT TCACTTGATC TGGGCGAGAA GACCGCTTCA GATAAGGCTT CTTATAAGCC TCGTCACTTT GCAGGTGAGC TTCCTCTGGT ACGCGAGGCG TAA
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Protein sequence | MTEGRNPAVV AGLLSGLVLV AEPASAHALT TNVIRQTPLG AIFTGIGIVL AAVAVISGTA FVVSRVVNRG EKTDGTGEEV QSGTSFQSTD EVTSSKQIPA ASDFSPEQSV VIPLDSSRRS IAAYKPKHMR VSQWDMTGSI RVQSAKPVVR KPQVVSADAE GVLPVRAKKA PAHSTNDYAQ IAENYTKLIS WRERTVARAK GAAAVLLERL GQDPMDGLPI IERADGTVGD VGTAWWTKAV GEESITRDFG IAEIGAEAIP EDFTNHAADI SSRISYVDQG VFPEKRTIDE LEHTDDWALA LAAMDEHLAR HDNLQMRKYH PVQLPIIGQA AAEAEVTSPA ESSGAKLAAS HKVSTAQVRS SREPNYAGVV AQSTAMPLVK ATNDTSSHVQ DIFDAVEREM AAELQAADER PTRELLRLIE GGTSKMKKIS SLDLGEKTAS DKASYKPRHF AGELPLVREA
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