Gene Apar_0453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_0453 
Symbol 
ID8413302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp522428 
End bp523039 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content46% 
IMG OID645022021 
Producthypothetical protein 
Protein accessionYP_003179475 
Protein GI257784258 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.699687 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTACC TACAAATTGC CCTTGTAGTT TTAGCCGTGG TTGGCGTTTG GGCTATTATC 
GAGGTTGCCC TGACATTAAG AACAACAAGA AAGTCGATTA CTGAGATTAC ACTCTCGGCT
AACAATACTA TTGAACAGAT TCAACCTGTT ATTTCAAAGA TTGATGGCAT GGTTGATGAG
TTAGATCCAA CTATTAAGCA GCTGCCTGCA CTTATGCAGA AAGTTGATGA TGCCGCAGAG
AATGCTAATA CCTCTCTTGA GAGTCTTAAC GTAGTTCTTG GTGATGTGGC TACCGTTTCT
GGCGCTGCGT CTGCAGTAAC TGCGACAGTA AGCAAAGCTG CAAGTGACGC TGTGACAGGC
GTTGTTGAGT CAGTATCAAA GCTGGGGACT GGTTTGGGAG GATCTTTGAA TCCTTCTAAG
CTTGCTGAGG CAGCTCAGGC TCGTTTGAGC GGTGTAACTG CAACAGCACA GCAGGGCGCA
CAGAGAGCAC AGGAGTACCT TGAGGAGCTT CCTTTGCTTT CTCAGGATAA GACAAAGCAT
TCCAAGCCAG CTCGTTCTGA GCAGTTCTAT ATTGAGTACG GTTCTGAGTC TTCTCAGAAG
ACTGAGGAGT AG
 
Protein sequence
MNYLQIALVV LAVVGVWAII EVALTLRTTR KSITEITLSA NNTIEQIQPV ISKIDGMVDE 
LDPTIKQLPA LMQKVDDAAE NANTSLESLN VVLGDVATVS GAASAVTATV SKAASDAVTG
VVESVSKLGT GLGGSLNPSK LAEAAQARLS GVTATAQQGA QRAQEYLEEL PLLSQDKTKH
SKPARSEQFY IEYGSESSQK TEE