| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0421 |
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| Symbol | |
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| ID | 8413270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 486675 |
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| End bp | 488477 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 645021989 |
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| Product | ABC transporter related |
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| Protein accession | YP_003179443 |
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| Protein GI | 257784226 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGATG TTTCTGTAAA AGAAAATAGC CCATCTGCTC GCGCTGAGTT AAAGGTTATC
TTGGATCATT TTGGCGCGTA TAAAAAGGAT TTTGTCATGT CGGGACTCTG TGTATTCACA
GAGTCCCTGC TTGAATTGAT GATTCCTATA CTCATGGCCC AGATTGTTGA TCAGGGTATT
TTGCAAGGTA ACCTTCAGAT TGTTTTTGTA AACGGTATTG TGATGGTTGT TTTTGCTCTT
CTCGCCATGC TTGCTGGTAT TGGTTATGCG CGTTACTCAG CAAAAGCGGC TATGGGACTA
GGTGCTCAGC TAAGACAAGA TGAATACCGT CGTATGGAAG AGTTTGCTTT TGCAAATCTT
GATAGATACG ATTCATCCTC TTTGGTCACA CGACTTACAT CAGACGTTAC TATTATTCAG
AATGCCTTTG CAATGGGTAC GCGCCCGTTT ATGCGTGGAC CAATTATGCT GGTTATGGGC
TTGGTTATGG CGTTTATTAT GAGTCCAGAG TTGGCAATAG TGTATTTTGC TGTTTTGCCG
TTCTTGGCTA TTGCACTCTT TTTTATTGTG AAGCGCGTTA GTCCTCTATA CAGGGTTATG
CAAGGCGCAA TGGATAAGCT TAACGAGGCT CTGCAGGAAG ACTTTGCCGC AGTACGCGCG
ATTAAGGCTT ATGTTCGAGA AGGATATGTC TCTGAGCGTT TTGAAAAGGT TAATACACAG
TATGCGCAGA CTGCCACAAA GACTTTTGGA ACTTCCGTTT TAAACCTGCC AATTTTCCAG
GCTTCTATGT ATGTCACCAA CGTGGCCATT CTTTGGTTTG GTGGTCAAAT GATTATGGCA
GGTAGATTAG GAGTTGGCGA ACTCACAGGA TTCATGAGTT ATGTCTTGCT CATCATGAAC
TCTCTTATGA TGATTTCTGG CGTGTTCTTG CTTACTGCTC GAGCCATTAC TAGTGTGCGT
CGAATCGGAG AGATTCTCTC TGAAGAGCCT GCTATTGAGT CTCCACAAAA TGGTTTGACT
CATGTTAAGA ATGGTGCAGT TCGCTTTGAA AATGTGTCTT TTAAGTACAG CTCAGATGCA
GAAGAAGACG TCCTAGAAGA TATTAGCCTC TCGTTTGAGC CAGGTTCTAC TATTGGTATT
CTTGGCGGAA CAGGTTCCGG AAAAACTACG CTTATTCAGC TGATTGCTCG CTTGTACGAT
GCAACTGAAG GCACCGTTTT TGTTGGCGAG AATGACGTCC GCTCCTACAA TCTTGTTTCA
CTTCGTGACG CGGTATCTGT TGTGCTTCAG AAAAATGTGC TGTTCAGCGG TACCGTCCGC
GACAACCTAC TTTGGGGAGA TCCTAACGCA ACTGATGAGG AACTGCTTCA CGCTTGCTCT
ATTGCGTGTG TTGATGAGTT TCTTGACAGG ATTGGTGGCT TGGACGGAGA CCTTGGTCAA
GGTGGCGTCA ATGTTTCCGG TGGTCAGAAG CAGCGTCTTT GTATTGCCCG CGCGCTTTTG
AAGAAGCCAA AAATTATCAT TTTTGATGAC TCAACTAGCG CAGTTGATAC TGCCACTGAT
GCAAAGATTC GCGCAGGTCT AGCTGAACTT GCTGACATGA CAAAAATCAT TATTGCCCAG
CGTGTTAACT CAGTTATGGA CTCAGATCAG ATTGTCGTTC TTGATAATGG CAGGGTTCAC
ATGACGGGAA CTCACGCAGA ACTTCTCGCC AAGAGTCCTA TTTACAGAGA GTTGTATGAG
TCTCAGATGG GTGGTAGTCA GCTAGACATT GACGCTGCTG GTAAGGAGGT GTCACATGGC
TAA
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| Protein sequence | MNDVSVKENS PSARAELKVI LDHFGAYKKD FVMSGLCVFT ESLLELMIPI LMAQIVDQGI
LQGNLQIVFV NGIVMVVFAL LAMLAGIGYA RYSAKAAMGL GAQLRQDEYR RMEEFAFANL
DRYDSSSLVT RLTSDVTIIQ NAFAMGTRPF MRGPIMLVMG LVMAFIMSPE LAIVYFAVLP
FLAIALFFIV KRVSPLYRVM QGAMDKLNEA LQEDFAAVRA IKAYVREGYV SERFEKVNTQ
YAQTATKTFG TSVLNLPIFQ ASMYVTNVAI LWFGGQMIMA GRLGVGELTG FMSYVLLIMN
SLMMISGVFL LTARAITSVR RIGEILSEEP AIESPQNGLT HVKNGAVRFE NVSFKYSSDA
EEDVLEDISL SFEPGSTIGI LGGTGSGKTT LIQLIARLYD ATEGTVFVGE NDVRSYNLVS
LRDAVSVVLQ KNVLFSGTVR DNLLWGDPNA TDEELLHACS IACVDEFLDR IGGLDGDLGQ
GGVNVSGGQK QRLCIARALL KKPKIIIFDD STSAVDTATD AKIRAGLAEL ADMTKIIIAQ
RVNSVMDSDQ IVVLDNGRVH MTGTHAELLA KSPIYRELYE SQMGGSQLDI DAAGKEVSHG
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