| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0407 |
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| Symbol | |
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| ID | 8413256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 470400 |
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| End bp | 471053 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 645021975 |
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| Product | ABC transporter related |
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| Protein accession | YP_003179429 |
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| Protein GI | 257784212 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR03608] putative bacteriocin export ABC transporter, lactococcin 972 group |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATACGT TTCTAAAGGT AGATGCTCTT AACAAGTCAT TTGGAAGTAA CACGGTTCTT
CATAACATTT CATTTGAGAT ACAGAGTGGA GAGTCAGTGG CTCTTGTGGG ACCTTCTGGT
TGCGGAAAAT CAACACTTCT TAATATCATT GGTCTTCTCG AGACTTTAGA CTCAGGCATA
ATTAGCCTTG AAGGCAGAGC ATACCCTTCA ATCAATAGCA AAAAAGCAAC ACTTATGAGG
CGCACTGAGA TCAATTATCT ATTTCAATCT TTTGCTCTCA TTAATGACTG GAAAGTAAGC
AAAAATCTCT TATTAGCGCT TCAATACACT AAACTGTCAA AGCAGGAGCA AGAGCGTCTT
ATTAGAACTG CTTTGGAAAG CTATGGAATT GGCGAGAAGT ACGATGCGGT TGTAAATGAG
CTTTCTGGTG GAGAAAAGCA GAGGGTAGCA ATTGCTCGAG CAATGATAAA ACCAGGTAAT
TTAATCCTTG CTGATGAACC AACCGGATCG CTTGATAAGG CTATGGCCAC TATTGTCATA
GATAGTTTGC TAGACTCCGT TCACGCAAAC CATAAAACGC TTCTTATGGT CACGCATGAT
ATGAATATTG CTCAACGTTG TGACCGAATT ATTGAATTGC CAAAACATCA ATAG
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| Protein sequence | MYTFLKVDAL NKSFGSNTVL HNISFEIQSG ESVALVGPSG CGKSTLLNII GLLETLDSGI
ISLEGRAYPS INSKKATLMR RTEINYLFQS FALINDWKVS KNLLLALQYT KLSKQEQERL
IRTALESYGI GEKYDAVVNE LSGGEKQRVA IARAMIKPGN LILADEPTGS LDKAMATIVI
DSLLDSVHAN HKTLLMVTHD MNIAQRCDRI IELPKHQ
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