| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0400 |
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| Symbol | |
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| ID | 8413249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 461563 |
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| End bp | 462702 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 645021968 |
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| Product | SufBD protein |
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| Protein accession | YP_003179422 |
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| Protein GI | 257784205 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.524622 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAACG TTTTGATTAA TCGCGCCAAC GTCCCTGCAG CTCAGACATG GAACCGTCTA
AACGCCAACT CTTTGTCAGT TACCGTCCCC AATCATGCCG ATGCAGGCAA AGTGTATCTG
CCTCTACCTC GTCTTTTTGA GCGCATTGAG TGTGGAATGG GTCAAGAGGT TACTGACTAC
GTTGAGTCTC AGGTATTTAA GTCTGATTTC TACAATGTTC CCGCTCATAC CAAGCGAGAA
GAACCTATTG TTGTTGCGGT TTCTGCTGCT CAAAAACAGT GTGCAAATAC CGGCATTATT
GTGCGTGAAG GCGCTGAAGC AATTGTAGTT ATCGCTGCAT TTGCAGGTGA GAAAAGCACA
GATGCTGCTA GCAACAACGC GCTCCCAACA AGCGCAGCAC TCACCCGCAT TGTTGTTGAA
GCTGGTGCAA AGCTACACCT TATTGAGATG CTTGGTGTAA ATGAAGACCA GCAGCACCTT
GAGAGTGTTG GACTCGAAAT TCACCAGGAT GCTACTGTTG ATGTTAAACA GTACGCTTTG
GGAGGATCAA CCATTGGTCT TGGCCTTACT GCTAACCTGG TTGGTGCTCG AGCCCGTCTC
GATCTCAACA ATCGCTATCA CGCTACCCAT AAAGAAACAC TTGATATCAA CCATCTAGTG
CGTATGCGTG GTACCTCTAC TCGCGCGCAG CTCACCGAGT CTGGTGTCCT TAACGAAGCA
GCTAAGAAGA CTCTTCGTGC AACCATCGAC CTTGTTCGTG GCGCAAAGGA TGCCCAGGGT
AACGAGATTG AAACAGTCAT GATTCTAGGC GACGACGTTG TCAACAAGAC CATGCCTGTT
ATTCTCTGCG ATGAAGATGA TGTTGCTGGC AATCACGGTG CTACTATCGG ATCCGTCTCT
CCTGATCAGC TTGATTATCT TGCAGCTCGA GGACTTTCTC GCCAAGCTGC AGAGCAGTTG
TTTGTACGCG CCCTCTTTGA AGACGCCATC ATCAACGCAC CTGAGGAGAT TTCTCACCGT
GTGGCCGTTG AGCGTTGCGA GGCTGAGCTG GGCGCAGAAA TTGCTCACGA CTATGATGAA
GCTGCAGCTA ACGACAATTC CAGCTCTGAA GCAAATTCCA ACAAAGGCGG TGTCGCATAA
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| Protein sequence | MDNVLINRAN VPAAQTWNRL NANSLSVTVP NHADAGKVYL PLPRLFERIE CGMGQEVTDY
VESQVFKSDF YNVPAHTKRE EPIVVAVSAA QKQCANTGII VREGAEAIVV IAAFAGEKST
DAASNNALPT SAALTRIVVE AGAKLHLIEM LGVNEDQQHL ESVGLEIHQD ATVDVKQYAL
GGSTIGLGLT ANLVGARARL DLNNRYHATH KETLDINHLV RMRGTSTRAQ LTESGVLNEA
AKKTLRATID LVRGAKDAQG NEIETVMILG DDVVNKTMPV ILCDEDDVAG NHGATIGSVS
PDQLDYLAAR GLSRQAAEQL FVRALFEDAI INAPEEISHR VAVERCEAEL GAEIAHDYDE
AAANDNSSSE ANSNKGGVA
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