| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0375 |
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| Symbol | |
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| ID | 8413224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 431402 |
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| End bp | 432847 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 645021943 |
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| Product | dipeptidase |
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| Protein accession | YP_003179397 |
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| Protein GI | 257784180 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01887] dipeptidase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTGATG CAGAACTCAA AACAAGCGCT GAGGCGTTTG TTAACGAGCA CTGGGAAGAG
ATTATTGAGG ATATTCGCTA TCTTGTGCAG GTAGAGTCCG TAGAAGATTT ATCCCTTGCA
GAGCCAGGCA AGCCTTGGGG TCCAAAGTCT TACGAGGCAC TTCGCCGCGG ACTTGAGATT
GCAGAGCGCC TGGGCCTTGA GACTACAAAT GTAGACGGTT ACCTGGGCTT TGGTGATCTT
CCTGGTGAGT CTGAGAAGTA CCTTGCTACC ATCGCTCACT CTGATATTGT TCCTCTGGGC
AAGGGCTGGA CGGTAGATCC GCTTGACGTT ACCCGCCGCG AGGGTTTCAT TCTGGGCCGT
GGTGTTCTGG ACGATAAGGG TCCTCTTGCC CTCTCCCTTT GGGCAGCTCA CTTCTTTGTT
GAGCAGGTTA AAAAGACCGG CAAGAAGCTT CCTTACACCC TGCGCGCCAT CGTTGGCAAC
AACGAGGAGA CCGGTATGGG TGACGTTCCT TACTACCTCT CCAAGTATCC AGAACCAGCA
TTCTGCTTTA CTCCTGACGC TGAGTTCCCA CTTATCTGCG GCGAGAAGGG CGTTTACCAC
GCACAGTTCA CTTCTCCAAA GATTGCTGGC GCATACAGCG AGAAGATCGT TGAGCTTGAT
GGTGGCACCG TACCTAATGC AATTCCAGGA CTTGCGAGCG CACTTGTTCG TGCTGACGCT
TCCACTTTGA CCAACACTAA TTCCATCAAA GTTGAAGACG CAGGCATTGA GGATGACGGG
ACCAAACTTG CACGCATTAA CGCAACAGGT AAGGGTGGAC ACGCTTCCAT GCCTGAGGGA
ACAGTCAATG CCATTGGACT GCTTGTAACC TATCTGCTTG ATAACAACAT CTGCGGAGAA
AAAGAACGCG ACTTTTTAAC CTTCTCACAA CAGCTTTGCT CAACCACTGA CGGCACTGGC
ACGGGCATCC AGAGCGCTGA CGACAAATTT GGTCCTCTGA CCTGCATCTC CGGTACTATC
CGTACTAAGG GAGATAGGTA TGTGCAGACT ATTGACTCTC GCTATCCTAC TTCCACTACT
GGCGAGGCTA TTACCACTCG TATGACAAAG CTAGGAGCTG AGCATGACTG CACCTTTGAG
GTGCTCTCTG ATGCAGTTCC TTTCTACATT GACCCAAGCT CTCCTGAGAT TACTACTCTT
CTTGATACGT TCCATGAGTA CACAGGTAGT AATGAGCAGG CATTTGTTAT CGGTGGCGGC
ACCTATGCAC GTCACTTTAA GCGTGCTGTT GCCTTTGGCC CTTATGACAG CAAAGCTGCA
AAAGACCTAC CTGAGTGGGT TGGCATGGAG CACGGTCCTG ACGAGGGAAT CTCTGAGGAA
TGGCTTAAGC GCGCTCTTAA GATTTACATT GTCAGCATTG CTCGCCTTAT GCAACTTGAC
CTGTAA
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| Protein sequence | MTDAELKTSA EAFVNEHWEE IIEDIRYLVQ VESVEDLSLA EPGKPWGPKS YEALRRGLEI
AERLGLETTN VDGYLGFGDL PGESEKYLAT IAHSDIVPLG KGWTVDPLDV TRREGFILGR
GVLDDKGPLA LSLWAAHFFV EQVKKTGKKL PYTLRAIVGN NEETGMGDVP YYLSKYPEPA
FCFTPDAEFP LICGEKGVYH AQFTSPKIAG AYSEKIVELD GGTVPNAIPG LASALVRADA
STLTNTNSIK VEDAGIEDDG TKLARINATG KGGHASMPEG TVNAIGLLVT YLLDNNICGE
KERDFLTFSQ QLCSTTDGTG TGIQSADDKF GPLTCISGTI RTKGDRYVQT IDSRYPTSTT
GEAITTRMTK LGAEHDCTFE VLSDAVPFYI DPSSPEITTL LDTFHEYTGS NEQAFVIGGG
TYARHFKRAV AFGPYDSKAA KDLPEWVGME HGPDEGISEE WLKRALKIYI VSIARLMQLD
L
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