| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0220 |
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| Symbol | |
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| ID | 8413068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 259396 |
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| End bp | 259785 |
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| Gene Length | 390 bp |
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| Protein Length | 129 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 645021788 |
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| Product | transcriptional regulator, GntR family |
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| Protein accession | YP_003179243 |
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| Protein GI | 257784026 |
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| COG category | [K] Transcription |
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| COG ID | [COG1725] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.945987 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.769281 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGATTATAC GTATTGATCA GATGGATCAA ATGCCTGTTT ATCAGCAGAT TCGCAATCAA
ATCGTTGCAG CCATTGGGCA GGGTGAATTG TGTCCTGCAG ATAGACTCCC GAGTGTACGT
TCACTTGCAA GTGATCTTGG CATAAATATT CATACGGTAA ATAAGGCATA TGCCGTACTA
AGGGATGAGG GATATCTTTT TATGCGGGGG CGTTCAGGCG CAATTGTGGC AGATTTTAAA
CAGACTGCTA CACCTGAGCG TATTGCGATA AATTCAGACG AACTCGCAGA AAAGCTCCAA
CAGCTCGCTT TAGAACATCG TGCTCAAGGG GGAACTAAGG AGTCATTTCT AGAGATTGCA
CATACACAAG CTAAGTACGC GTTCGCCTAA
|
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| Protein sequence | MIIRIDQMDQ MPVYQQIRNQ IVAAIGQGEL CPADRLPSVR SLASDLGINI HTVNKAYAVL
RDEGYLFMRG RSGAIVADFK QTATPERIAI NSDELAEKLQ QLALEHRAQG GTKESFLEIA
HTQAKYAFA
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