Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0171 |
Symbol | |
ID | 8413019 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | + |
Start bp | 197690 |
End bp | 197974 |
Gene Length | 285 bp |
Protein Length | 94 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 645021743 |
Product | phosphotransferase system lactose/cellobiose- specific IIB subunit |
Protein accession | YP_003179198 |
Protein GI | 257783981 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3414] Phosphotransferase system, galactitol-specific IIB component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.430565 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTATCC AGAAAATTCT TTGTTGTTGC GGAAGTGGAC TTGGCTCCAG CCTTATGGTT GAGATGCAAA TCCAGGATGT TTTAAACGAG CTGGGCATAA GTGGAGTTGA GGTTGAGCAC TCAACGGTTT CCGACGTTAC TCCTGGTGCA GCTGACCTCT TCATTGTTGC TCGCGATCTC GAAGATTTTA TCGCTGATAT TCCAGATAGC GAGAAAATCA TTCTCTCCAA CATTCTTGAT AAAGACGAAA TGAAGGAAAA GCTTACCGAG AAATTTGGCC TGTAA
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Protein sequence | MAIQKILCCC GSGLGSSLMV EMQIQDVLNE LGISGVEVEH STVSDVTPGA ADLFIVARDL EDFIADIPDS EKIILSNILD KDEMKEKLTE KFGL
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