Gene Apar_0138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_0138 
Symbol 
ID8412984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp157251 
End bp158177 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content51% 
IMG OID645021708 
ProductIndigoidine synthase A family protein 
Protein accessionYP_003179165 
Protein GI257783948 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2313] Uncharacterized enzyme involved in pigment biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAACC TGAAGGATTT TCTTGTTGTA TCTGACGAGG TTAAAGAAGC TCTTGAGCAG 
AACAAGCCTG TTGTAGCTCT AGAGTCCACC ATCATTTCTC ACGGTATGCC TTACCCACAA
AACGTCGAGA CCGCTCTGAA GGTTGAGCAG ATTATCCGCG ACAACGGTGC AATTCCTGCA
ACCATCGCAA TTATTAACGG CCAGATGCGT GCCGGTCTTT CCGCTGACGA GATTGATTAC
CTAGGCAAAA AGGGCCGCGA GGTTGCTAAG GTCAGCCGTC GCGACCTCCC AGTCATCATT
GCTGAGAAGA AAGATGGTGC AACTACCGTC ACTACTACCA TGATGATTGC TCACATGGCA
GGCATCGACG TCTTTGCAAC CGGCGGCATC GGTGGCGTTC ACCGTGGCGC TGAGACCACC
ATGGACATCT CCGCTGACCT CGAGGAGCTT GCACAGACTC CTGTTATGGT CATTTGCGCT
GGTGCAAAGT CTATTCTTGA CCTCGGTCTT ACCCTTGAAT ACCTGGAGAC CAAGGGTGTT
CCAGTACTTG GCTACCAAAC TGAGGAGCTT CCTGCGTTTT ACACCCGTAA GAGCGGCTTT
AGCGTTGACT ACCGCGTTGA CACACCTGCT GAGCTGGCAG AGATCTTTAC TACCCAGCAG
CAGATTGGTA TGAACAGCGG TCTTTTAGTC ACCAATCCAA TTCCTGAGCA GTATGCAATG
GATAAGGACA CTATTGACGC GGCTATCGAG AAGGCCCTTG CAGAGGCAAA GGCAAACGGT
ATCCACGGCA AGGAGTCCAC ACCATTTTTG CTAGCAAAGG TCGCAGAGAT TACCGGCAAC
GACTCTCTTG AATCCAACAT CCAGCTGGTC TTTAACAACG TTGCTCTTGG CGCAAAGGTT
GCTTCCGAGG TCTGCCGCCG CAAGTAA
 
Protein sequence
MSNLKDFLVV SDEVKEALEQ NKPVVALEST IISHGMPYPQ NVETALKVEQ IIRDNGAIPA 
TIAIINGQMR AGLSADEIDY LGKKGREVAK VSRRDLPVII AEKKDGATTV TTTMMIAHMA
GIDVFATGGI GGVHRGAETT MDISADLEEL AQTPVMVICA GAKSILDLGL TLEYLETKGV
PVLGYQTEEL PAFYTRKSGF SVDYRVDTPA ELAEIFTTQQ QIGMNSGLLV TNPIPEQYAM
DKDTIDAAIE KALAEAKANG IHGKESTPFL LAKVAEITGN DSLESNIQLV FNNVALGAKV
ASEVCRRK