Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0131 |
Symbol | |
ID | 8412977 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | - |
Start bp | 149076 |
End bp | 150104 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 645021701 |
Product | hypothetical protein |
Protein accession | YP_003179158 |
Protein GI | 257783941 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.659387 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.970051 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGATTAAGC ATTCCGCTAA CGATATGTTC AGTGAACAGG TAGACCGCCT GGTAGCCAAA TGTGCACAAG AAAAAAATAT TTTCTCTGAA GCTGCACGCT ATGAGCTGAA ACTTGCAGTA GAGGCTTCTC CTGAAGACTT TATTGCTGAC GAAGAAGAAA AAGCTTTTGC TCAATATGCC AATGCAATTG GCAAGTATCA GACTGAAATT ACTAAAGAGA TTGATTCCGA TGCCGACTTC TTTTCAAGCC GCATGGATCT GCTTAACTTC TTGCATAATC AAATAACGAA TATTATTGAA AATCCAGCTC TTTCTAGCAC AAGTATCAAT CTGGAATCCC AGCGAATTCT CGCTCAAATA TCCAACAATC ATCCTGCGGC AATCCTCAAC GACTTGCTTG AACTGCAAAA AGAATTTGAC CCTATTTTTA GACCAAAACT GGAACAAGCA AAGCAAGAAC AAGGAGATGC TTGGAGTTTT GCTGAAGCCC GTCCACTCTT GCGACTGTAC GCACAAATTG CTCAAGTAGC AACTGACTGC GCTTGCTTCA AACTCTCCAA AAAGGCCTGT GAAGACCTTT TGTTTTTCTC GCCAACAGAT TTACTCGGTG CACGTTTTAC CTTGGCATAT GTTCTTGCTC GCTTAGAGGA CGAAGAGGGG CTCCGCAAAC TTGATGAAAG CTGCGGATAT CAATCAAACG CCTGGATCCG CTTAGCATTT ACGCTGCTAT TCTTCAAGTT AAATCGCATG TCCGCAGCAA AACGTGCGCT TAAAGGCTTT ATTAACCTTG GCGAGGGCGC AGCATATGCG CTGCTCAGAC CTTCTTTTGT TGATCTCTAC ATTCCATGTC GAGTCAACTT TACGCCTGAT ACTTTTGCCG AGAACGTTAT AGCTGTTCAC GAAGCTGAAG CAATTATCGC TGACGTACCA GAATTTATTT CGTGGGCAGA GTCAGTTCCC GGCGTAATTC AAAGTGCTCG CGACTACGCG TTTAAAGCCG GACTAGACTG GTGGGAAAAC GAAGAATAA
|
Protein sequence | MIKHSANDMF SEQVDRLVAK CAQEKNIFSE AARYELKLAV EASPEDFIAD EEEKAFAQYA NAIGKYQTEI TKEIDSDADF FSSRMDLLNF LHNQITNIIE NPALSSTSIN LESQRILAQI SNNHPAAILN DLLELQKEFD PIFRPKLEQA KQEQGDAWSF AEARPLLRLY AQIAQVATDC ACFKLSKKAC EDLLFFSPTD LLGARFTLAY VLARLEDEEG LRKLDESCGY QSNAWIRLAF TLLFFKLNRM SAAKRALKGF INLGEGAAYA LLRPSFVDLY IPCRVNFTPD TFAENVIAVH EAEAIIADVP EFISWAESVP GVIQSARDYA FKAGLDWWEN EE
|
| |