| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0130 |
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| Symbol | |
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| ID | 8412975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 147832 |
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| End bp | 148887 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 645021699 |
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| Product | Transketolase central region |
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| Protein accession | YP_003179157 |
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| Protein GI | 257783940 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3958] Transketolase, C-terminal subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAGATA CATCTTCGAA GCCAGCATGC ATTTCAGCTG AAGAGTCACA GATGCTTGCA
GATATGAATA CAAAAGAAGT CTTTGGCTGG GTTATGGGTA AACTTGCTGA AGATGATGAG
CTGCTAACTG TTGCTGTGGC TGACTATGGT CGTCGTTTGA ATTTGGACCG TTTCCGAGAG
CTTCGGCCAG AGGGATACAT TCAGTGTGGC ATTGCGGAAC AAAATCTTAT TGAAGTGGCC
TCTGCCTGCG CAAATGAGGG TTTTCACGTC TTTGCGCCGT GTTATGCCAC GTTTGTAACT
TCACGAACGC TTGATCAGAT TCGCATTAAC CTTGGTATGA TGAAGTCGCC TGTGATGCTT
GTGGGCGTTG CTGCTGGCTG CGAATCAGCA ACTACAGGAC CTTCTCACAT GGCTTTGGAG
GATATTGCGG TTACCAGGAC TATTCCGGGA CTGTCTGTAT TTAATCCGTG TGATAATGCG
CAGCTTGCTG CAACACTTAT GGAGCTTGCA AAGAATCCGC GACCAGCTTA CGTACGCATG
ACCTCGTGCG ATGGTGTTAA TCTGCATCCA AACGGTTACG TTTTTGATGC ATCTGGTGTC
GAGAAACTCT TTGAGTCGCC ACGCGTGGAG GGTGCAAGTG GTGTGGCGGG AGCGTCTGAG
TTAGAGGACG CTGTCCAGCT GAGGCGCGTG AGCGTTCTTG CGACAGGCGC GATAACCAGC
CGAGTTGTTG AGGCTGCTCA AAGGGTTGCA GATCAGATTA CTACAGCACG AACAAACATT
AAGGTTTACG GTGTGTCAAG CATCAAGCCT CTTGACACTT CGTTGACACA AATTTGTCAG
TATTCTGACG TGGTTATTAC CGTTGAAGAG CACAGTATTT TGGGTGGATT TGGTAGCGCG
GTTGTCGAGC AAATTAGCGC TTCAGGTACA TGTCCACAGG TAATACGTGT GGGTATGCCC
GATAAGTACC TTGAAGCAGA CGTTCACCAC AATATTCTTG CACGCGCTGG ACTATCGGTT
GAGAGTCTAC AAGAGGTTTT TATCGCCAAT TGTTAA
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| Protein sequence | MLDTSSKPAC ISAEESQMLA DMNTKEVFGW VMGKLAEDDE LLTVAVADYG RRLNLDRFRE
LRPEGYIQCG IAEQNLIEVA SACANEGFHV FAPCYATFVT SRTLDQIRIN LGMMKSPVML
VGVAAGCESA TTGPSHMALE DIAVTRTIPG LSVFNPCDNA QLAATLMELA KNPRPAYVRM
TSCDGVNLHP NGYVFDASGV EKLFESPRVE GASGVAGASE LEDAVQLRRV SVLATGAITS
RVVEAAQRVA DQITTARTNI KVYGVSSIKP LDTSLTQICQ YSDVVITVEE HSILGGFGSA
VVEQISASGT CPQVIRVGMP DKYLEADVHH NILARAGLSV ESLQEVFIAN C
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