| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0057 |
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| Symbol | |
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| ID | 8412899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 59725 |
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| End bp | 60969 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 645021623 |
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| Product | ABC transporter related |
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| Protein accession | YP_003179084 |
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| Protein GI | 257783867 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGATA ATACTCCGCA GCCACCTGTT CCTAACGCTC CCGTTTCTCC CGCTGCACCT
GCACCAGATG CGCCGGCGTC TCCCGCCGCG CCTGCACCAG CTGTGTCCGT ACCAGCTGCG
CCTACACCAA CTGCGCCTGC AGCTGCCGTT GCATCAACAA CGCCAGCTCC AGCGGGTGTC
ACTCCAGCGG CTTCTGGTGA GGTAGTTCCT GTGTTGAGCG TTCAACACTT CACCAAGAAA
TACGGCTCAA AGGTAGCTGT TTCTGATCTT TCGATCGACG TTATGCCTGG CGACATCTAC
GGTTTTATCG GCCACAATGG CGCAGGTAAA ACTACGCTTA TTAAGTCTGT CGTTGGCGCT
CAGCCATTTG AGGGTGGCGT CATTTTTGTG GACTCGAAGA ATGTACTGGT TGATCCTGTT
GGCACAAAGC AGGTCATTGC TTACGTCCCA GATAACCCAG ACATTTACGA GTTCATGAGC
GGCATCAAGT ATCTCAATTA CGTCTGCGAC ATCTTTGGCG TTCCTGCGGA GAATCGCGTT
GAGCGTATTA CTACTATGGC TAACCGTCTG GGCATCACCG ATTCCCTGTC AAATGCTATT
GGTAGTTATT CTCATGGTAT GAAGCAGAAG CTAGTTTTGA TTTCCGCCCT ACTTCACGAG
CCAAAGCTCA TTGTTTTGGA TGAGCCATTT GTTGGCTTGG ATCCAGCAGC AAGCTTCGAG
TTGAAGAAGA TGCTACACGA GCTGGCTGAT CGTGGATCTG CAGTGTTCTT CTCGTCACAT
GTTCTTGAGG TTGTCGAGAA ACTCTGCAAT AAAATTGCAA TTATTCGTCA GGGCAAGCTT
CTTGCTGCAG GTAAAACGGA TGAGATTCGC GGCAATGCTT CTCTTGAGGA AGTCTTCCTT
GGTCTTGAAG CTGGCGCTCC TGGCGTTTCT GCCGAGATTG CTCAGGACAT GGCCACCACA
AAGGATGGCG CAGCTGTTCA ACCAGTCATT CCAGGTACGC CTGTAGCCAC TACACCCGCA
GCTCCAGTTG CACCAACAGC ACCGGTTACA CCTGCGGTGC CCGCTACTCC AGCCGCACCA
GCTGCTCCAG CCACATCAGT GGCACCTGCA ACACCGGCTG CTCCAGCAGC ATCGTCTGCG
CCTGCAACTC CAGCGGGATC TGCAGGTCCT GCTGCGCCAA CTACTCCTGG AGCACCAGTG
CCTCCAGGCG CTCCAGTTCC TCCTTCCTTC CCTAAGGAGA ACTAG
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| Protein sequence | MADNTPQPPV PNAPVSPAAP APDAPASPAA PAPAVSVPAA PTPTAPAAAV ASTTPAPAGV
TPAASGEVVP VLSVQHFTKK YGSKVAVSDL SIDVMPGDIY GFIGHNGAGK TTLIKSVVGA
QPFEGGVIFV DSKNVLVDPV GTKQVIAYVP DNPDIYEFMS GIKYLNYVCD IFGVPAENRV
ERITTMANRL GITDSLSNAI GSYSHGMKQK LVLISALLHE PKLIVLDEPF VGLDPAASFE
LKKMLHELAD RGSAVFFSSH VLEVVEKLCN KIAIIRQGKL LAAGKTDEIR GNASLEEVFL
GLEAGAPGVS AEIAQDMATT KDGAAVQPVI PGTPVATTPA APVAPTAPVT PAVPATPAAP
AAPATSVAPA TPAAPAASSA PATPAGSAGP AAPTTPGAPV PPGAPVPPSF PKEN
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