| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0024 |
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| Symbol | |
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| ID | 8412866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 29027 |
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| End bp | 30466 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 645021593 |
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| Product | replicative DNA helicase |
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| Protein accession | YP_003179054 |
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| Protein GI | 257783837 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0305] Replicative DNA helicase |
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| TIGRFAM ID | [TIGR00665] replicative DNA helicase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACAAG ACTCGTTTGA GATGAATCCT ACGCAATTGA CAGCCCTAGA GAACGCTTCT
ATGCCACAAG ATTCTGATGC TGAGTTTTCC ATTCTTTCTG CAATGATTCT CTCGGAAGAG
ATCCGAGGAG AATGCCTTAT TAGGCTTTCT TCCGAGGATT TCTATATTCC GTCTAATCAA
ATTATTTTTG AAGCAATTAA GTCGCTGTTT GATAACAATA AGCCGGTAGA TGTAATTTCA
CTTGCTGATC ACCTTAAAAG TAATGGTAAG TTTGAGCGTG CTGGTGGAGC TGTTCGTTTA
GCGGAGCTTG GCAATAACCC ACTAGCTATG GTTGGCTGGG AAAACCACGC TGTTATGTTG
CATCGTGATA CTACGCTCAG AAAGATGATT AGCGCTTCTG CAAAGATTTC TGCTTTGGCC
TACAATGCCC CGGAGGATAC AAAGCAAGTT GTTGATCAGG CAGAAAAGCT CATTTTTGAC
GTAACTAACA GAGATGTTCA GCAGTCCGAG CAGAACATCG AAGATATCAT GACTAATCTT
TTTGATGAGC TTCAGCAAAA TGCTGGAAAA GATGCTGCTG AGCTGGGTGT TCAAACTGGA
TTTGCAACTC TTGATAATCT TTTCCAAGGC CTTCGTCCTG GTCAGATGGT TGTTATTGGC
GCTCGCCCTG GTGTTGGTAA GACTTCTTTT GCTCTTAGTA TGGCTTATAA CGCTGCGGTT
TCCGGTGCAA CTGTTGCGCT CTTCTCGCTA GAGATGAGCA AAATTGAGAT TGCACAGAGG
CTCTTGGCTT CTGAATCAAA AGTAGATTTA CAAACCATTC GTTCTTCTAA CATCAGAAAT
GAGCAGTGGC CTACCCTTCT AGAGGCAGCA GAGCGTATTT CTCGCCTTAA AATCATTGTT
GACGATACTC CAGGCACAAC AGTCACAGAA ATCCGTGCAA AAGCCCGTAG AATGCTTAAT
AAGGCCGAGA AGGGCGTCAT TATCATTGAC TACCTCCAGC TACTTTCTCC ACCAGCAGAA
AGGGGGCGTG CAGATAGTCG TGCAACTGAG GTTTCTGAGA TGTCTCGTGG CATTAAGATC
ATGGCAAAAG ACCTTAAGGC GCCCGTTATT GCGCTTTCTC AGCTCAACCG TACGCTTGAG
AACAGAAACG GCAAGCGCCC ACAGCTCTCT GACCTGCGTG AGTCTGGTGC GATCGAGCAG
GATGCAGATA TTGTTTTGCT GCTCGACCGT TCGCTCAGTG ATGAAGAAGC TGCACGTGAC
GATCGACCTG ATAAAGATGT TACCAACATC ATTGTTGCAA AGAACCGTGC TGGTGCTTTA
AGAGATGTTC CTATTATGTT TATGCCAACG TCTACTAAAT TTGTTGAGCT TTATCAGGGA
AACAATTACT CAGAAAGCGA AGCAGCGCAG TATGCTGCAA TGACAAATCC TGCACACTAA
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| Protein sequence | MAQDSFEMNP TQLTALENAS MPQDSDAEFS ILSAMILSEE IRGECLIRLS SEDFYIPSNQ
IIFEAIKSLF DNNKPVDVIS LADHLKSNGK FERAGGAVRL AELGNNPLAM VGWENHAVML
HRDTTLRKMI SASAKISALA YNAPEDTKQV VDQAEKLIFD VTNRDVQQSE QNIEDIMTNL
FDELQQNAGK DAAELGVQTG FATLDNLFQG LRPGQMVVIG ARPGVGKTSF ALSMAYNAAV
SGATVALFSL EMSKIEIAQR LLASESKVDL QTIRSSNIRN EQWPTLLEAA ERISRLKIIV
DDTPGTTVTE IRAKARRMLN KAEKGVIIID YLQLLSPPAE RGRADSRATE VSEMSRGIKI
MAKDLKAPVI ALSQLNRTLE NRNGKRPQLS DLRESGAIEQ DADIVLLLDR SLSDEEAARD
DRPDKDVTNI IVAKNRAGAL RDVPIMFMPT STKFVELYQG NNYSESEAAQ YAAMTNPAH
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