Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0001 |
Symbol | |
ID | 8414261 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | + |
Start bp | 250 |
End bp | 1116 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 645021567 |
Product | ATP-binding region ATPase domain protein |
Protein accession | YP_003179032 |
Protein GI | 257783815 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.557706 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAGAG ATTTTTTTCC TTTTGTTGAG GAAAATACCA ACCAGGATGA AAAAAACACT GATTCTAACA ACTCTCTAAC AGTTCGTTAT GCTGCACGTA TTGCAGTGTA TGATGATAAA TCCGCAGCAC CTCGCGTTGT TCTTGTTGAA CCTAAAGATG TTCGCTCTTA TCTTGATGAA ATCGCAGCTA CAGTTAATCA GCTTGCCCAC GAGCAAGGTG GAAAAATTCC TTTTATGGTT ATGCGTGAGA TTGTGGAAAA TTTCATTCAT GCTCGCTTTG TAGCGCCCAC AATCTCAATT ATGGACAACG GAAATACCAT TAGGTTTTCT GACCAAGGTC CTGGTATTAA AGAGAAAAAC CGTGCTCTTG AATTTGGTAC CTCTTCTGCA ACAGAAGAAA TGAAATCATT TATTAGAGGT GTTGGTTTTG GTCTTCCATA CGCTCAACAA TACATGGTTG AAAAGGGTGG AAGTCTTACT CTCGAAGACA ATATCTCTGG CGGAACGATT GTTACCTTAT CAACACGTCG TTCCAAAGAT GCTCACATTC AGACACTTCC AACTCAAGAA GATGCTGAAG AAATGACTGT TAGCCAAGAG GAACAATCAA TTTCAAGAGC CTTACATACT GTTCCTCAGC AGCCAGTTAC ACAGCTTCCT AATTTAGTTC TTACAGATCG AGCAAAACTT GTTCTCCAAT ATCTCTCTGA ACATGAATGG GTTGGAGCAA CAGAATTAAC AAGTGCTTAT GGTCTCTCAA CACCAACGTG GTCAAGAGAG TTAAAGTCAC TGGTAAATAT AGGAATAATT GGAAAAATTG GTCAAAAATA TAAGCTCACA ACCATTGGAG AAACACTCCT TTCATAG
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Protein sequence | MARDFFPFVE ENTNQDEKNT DSNNSLTVRY AARIAVYDDK SAAPRVVLVE PKDVRSYLDE IAATVNQLAH EQGGKIPFMV MREIVENFIH ARFVAPTISI MDNGNTIRFS DQGPGIKEKN RALEFGTSSA TEEMKSFIRG VGFGLPYAQQ YMVEKGGSLT LEDNISGGTI VTLSTRRSKD AHIQTLPTQE DAEEMTVSQE EQSISRALHT VPQQPVTQLP NLVLTDRAKL VLQYLSEHEW VGATELTSAY GLSTPTWSRE LKSLVNIGII GKIGQKYKLT TIGETLLS
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