Gene AnaeK_3220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnaeK_3220 
Symbol 
ID6787469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. K 
KingdomBacteria 
Replicon accessionNC_011145 
Strand
Start bp3622475 
End bp3623515 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content78% 
IMG OID642764691 
Productsecretion protein HlyD family protein 
Protein accessionYP_002135570 
Protein GI197123619 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.430212 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACGAG TCGTCGCGGT CCTGGTGGTG CTCACGCTCG TGCTGGCCAG CCTCATCGGC 
TACCGCCTGT GGAGCCAGGC GCGCGCCCTC TCGGCGCCCG CGGGTGGCTC GGGCGAGGTC
GAGGGGACCG TGGTCGAGCT CTCCTCGCGC GTGGGCGCGC GCATCCTGGA GCTGAAGGTG
CGCGAGGGCC AGCGGGTCAA GGCGGGCGAC CTGCTGGTGC GGCTCGACTG CGCCGACCCG
CAGGCGGCGC TCGCCGAGGG CGAGGCGCGC CTGGCGGCGG CGCGGGCGCA GGCGACCGCG
GCCATGGCCC AGGTGAAGGC GTCGGAGCGG TCGCGGGTGG CGGCGCGCGC CGGGGAGGAG
GCGGCGCGGG CGCAGGCCGC GGCCGTGGCG GCGCAGGCCG AGGCGGCGGA GCGGCAGGCG
CGGCGCCTCG CGAACCTCCC GGAGGACGTG GCCGCCTCGA ACATCGATCT CACCCAGGCC
AGCGCGGCGC AGCTCACGCA GCAGACGCTC GCCGCACGCG CGCAGGCGGC CGCGAGCGCC
GAGCAGGCGC GGGCCGCCGC GGTGAGCACC GACGCGACCG CCTCGCAGGC GCAGGCGGCG
CTGGCGCAGG TGCGCGCGGC GGAGGCCGCG GTGGAGCGCG CGCGCATCCT CGCGGGCGAG
TGCGAGCTCC GCGCCCCCCG CGACGCCGAG GTGCAGACGC TGCCGCACGA GGCCGGCGAG
CTGGTGGCGC CCGGCGCGGT GCTGGCGCGC CTGGTGGACC TGTCCGAGGT GACCGCTACC
TTCTACCTGC CCAACGCCGA GATCGGCGCG GTGAAGCCGG GGCAGAAGGC CGAGGTGGTG
GCCGACGCCT GGCCGGGCGA GCGGTTCCAG GCGACGGTGC GCACCGTCTC GCTGGAGGCC
GAGTTCACAC CCAGGAACAT CCAGACGCGC ACCGACCGCG ACCGGCTCGT CTACCCGGTG
GAGGTGGTGG TGGTGAACCG GGACGCGAAG CTCCGCGCGG GCATGCCGGT GCAGGTGACG
CTGCCCGGCA CCGGCCGCTG A
 
Protein sequence
MRRVVAVLVV LTLVLASLIG YRLWSQARAL SAPAGGSGEV EGTVVELSSR VGARILELKV 
REGQRVKAGD LLVRLDCADP QAALAEGEAR LAAARAQATA AMAQVKASER SRVAARAGEE
AARAQAAAVA AQAEAAERQA RRLANLPEDV AASNIDLTQA SAAQLTQQTL AARAQAAASA
EQARAAAVST DATASQAQAA LAQVRAAEAA VERARILAGE CELRAPRDAE VQTLPHEAGE
LVAPGAVLAR LVDLSEVTAT FYLPNAEIGA VKPGQKAEVV ADAWPGERFQ ATVRTVSLEA
EFTPRNIQTR TDRDRLVYPV EVVVVNRDAK LRAGMPVQVT LPGTGR