Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AnaeK_2258 |
Symbol | |
ID | 6783982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter sp. K |
Kingdom | Bacteria |
Replicon accession | NC_011145 |
Strand | + |
Start bp | 2535498 |
End bp | 2537159 |
Gene Length | 1662 bp |
Protein Length | 553 aa |
Translation table | 11 |
GC content | 82% |
IMG OID | 642763718 |
Product | SCP-like extracellular protein |
Protein accession | YP_002134614 |
Protein GI | 197122663 |
COG category | [S] Function unknown |
COG ID | [COG2340] Uncharacterized protein with SCP/PR1 domains |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.266463 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGGCGAT CCCGTCCCGC CCGCCGGTCC GCCGCGCGCA CCGCGCTCGC GGCCGCGCTG GCGGTGGTGG CCGGCGCCTG CGCGGGGCCG GCGCGCGCGC CCTCCCCCGC CGTGCCGCCG GCCGCGCCGA CGAGCGCGTC CCCTCACCCG GCCCCTTCGT CGGCCGCGCC CGCGCCCTCC GCGGCCGAGC CGCCCGGCAC GGCCTACGGC CGCGAGCCCG CGGTCCAGGC CACCCGGGTG GAGACCGAGG CGCTCGGCGC CGCCGCGGGC CGCCTCGCCG CGCGCGGCGC CCCGCGCACC TCGGCGGCCC TCTCGCTCGC CGCGCGCGAG CTCGCCGCCC TCGCCGCGAC CGGCGCGGAG GAGCCGCTCG CCCGCGAGCA CCTCCGCGGC GCGCTGGCGC GCGCGGGCGC CTACGACCCC GCGCCGGCGG CCTACCTGGT GCGCACCGCG CCCGACCGCG CGGCCGCGGC CCTCGCCGAC GTCATCCCGC GCGGCACCGC CACGCACGTG GGCGCCGGCG CGGCGCAGGC GGACGGGTCG GCGTTCGTGG TGGTCCTGGC GTCGGACCGC AAGGTCCGCC TCGAGCCGGT CCCCCGCCGC GTGGCCGAGG GCGCCACGGC GACGATCGCC GGCGCGCTGC TCGGCGGCCT CACGCGCCCG CGCGTCTTCG TCACCTCGCC CGCGGGCGCC GTCCACGAGG AGGCGGTCTC GGGCGGCCCG GACGGCTTCC GGGCGCGCGT CGCGTTCGCC GCCGCCGGGC GGCACGTGGT CGAGGTGCTC GCGCACGGCC GCGGCGGGCC CGAGGTCGCG GCCCTGCTCG AGGTGCAGTC CGGCGCGCCC GCGGCCCCCG CGGCGCAGCC GGTGCCCGCG CGGCGGCCCG CGCCGGAGCC CGGCGACGCC GCGGCCGCGG AGGCCGGCGT GGTGCGCGCC ATCAACGCGC TCCGCGCCGC GCGCGGGCTC CAGGCCGTGA CGGCCGCGCC CCGGCTCACC GAGGCCGCCC GCGCGCACAG CGCGAACATG CTCGCGCAGG GCAAGGTGGC GCACGTGCTC CCGGGCACGG GCGAGCTGGT CGAGCGCCTC GCCCGCGCGC GCATCGCCTA CCGGCGCGCC TACGAGAACG TGGCCCGCGC CTCGACGGCG CTCGAGGCGC ACCAGGCCGC GGAGGAGAGC CCGGCGCACC TCGGCAACCT GCTCCAGCCC GGCGTGTCGA GCGTGGGCGT CGGGATCGCG CGGGGCCGGC TGTCGTCCGG CGACCCCACC GTCTACCTGA CCGAGATCCT GATCGAGCCG CCGGACGACG GCGGCGGCTC GCGGCTCACG CCCGACGCGC GGGTGCGGGA GGCGATCTGG GCCGAGCGCG CGCGCCTGGG GCGGGCGCCG CTCACCGCCG ACCTGCGCCT CGACGCGCTC GCGCGCGAGG CCGCGGTGGG CATGCGGGCG CGCGACGAGA CCGACCCGGG CGACGTCGAG GTGCGCGCGC TGAAGCTCCG GCGCCGGATC GCCGCGGTGG ACGTGTTCGT GGTGAGCGGT CCGGGCGAGG CGGCCCGCTC CGCGAACGTG GGCGACGGAC GCTTCGCGCG GGTGGGCGTG GGCGCGGTGC AGGGGGACAG CCGCCGGTTC GGGCCGGGGC GGCTGTTCGT CGCGGTGATC TACACGGACT GA
|
Protein sequence | MRRSRPARRS AARTALAAAL AVVAGACAGP ARAPSPAVPP AAPTSASPHP APSSAAPAPS AAEPPGTAYG REPAVQATRV ETEALGAAAG RLAARGAPRT SAALSLAARE LAALAATGAE EPLAREHLRG ALARAGAYDP APAAYLVRTA PDRAAAALAD VIPRGTATHV GAGAAQADGS AFVVVLASDR KVRLEPVPRR VAEGATATIA GALLGGLTRP RVFVTSPAGA VHEEAVSGGP DGFRARVAFA AAGRHVVEVL AHGRGGPEVA ALLEVQSGAP AAPAAQPVPA RRPAPEPGDA AAAEAGVVRA INALRAARGL QAVTAAPRLT EAARAHSANM LAQGKVAHVL PGTGELVERL ARARIAYRRA YENVARASTA LEAHQAAEES PAHLGNLLQP GVSSVGVGIA RGRLSSGDPT VYLTEILIEP PDDGGGSRLT PDARVREAIW AERARLGRAP LTADLRLDAL AREAAVGMRA RDETDPGDVE VRALKLRRRI AAVDVFVVSG PGEAARSANV GDGRFARVGV GAVQGDSRRF GPGRLFVAVI YTD
|
| |