Gene AnaeK_1085 details

Gene Information

• Locus tag: AnaeK_1085
• ID: 6786334
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Anaeromyxobacter sp. K
• Kingdom: Bacteria
• Replicon accession: NC_011145
• Strand: +
• Start bp: 1226307
• End bp: 1226921
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 77%
• IMG OID: 642762537
• Product: Rhomboid family protein
• Protein accession: YP_002133449
• Protein GI: 197121498
• COG category: [R] General function prediction only
• COG ID: [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGGCGCT TCCCCTGGAT CACCGCCTCG GTGCTCGCCC TTGCCGTCGG CGCGTACCTC 
GTGCCGTCGA TCGGCGAGCT GCTGATCCTC GACCGCGCGC GCGTCGCGGC CGGCGAGTGG 
TGGCGCCTGC TCACGGGCAG CGTCGTGCAC TTCTCGGCGT CGCACCTCGG CGCCGACGCC 
CTCGCGTTCG GCATCGCCGG CGCGCTGCTG GAGCGCCGCG GCCGCGCGAC GTTCGCGGCC 
CTGACGCTCG CGTCGGCGCT CGCCGTCGGC CTCGCCGTGC TCTGGCTCGA GCCCTCCCTC 
GAGCGCTACG CCGGGCTCTC GGGCGTGGCG TACGCGGCGA TCGTCGCGCT CGCGCTCGCC 
GGGCAGCGCG ACCCGGGCAC GATGGCGACG CTCTCCCGCA TCGCGCTCGT GGCATGCGTC 
GCGAAGCTGG CGTGGGAACT CTCGACGGGG CGGATGCTCC TCGCCGGCGC GCCGCCGGGG 
GTCGTCGCGG TCCCGCTCGC CCACCTCGCG GGCGCGATCA CCGCCGTCGC CGTCTCGGGG 
ATGAAGCGCA GGGGCGGCAC TGCCTTGCTC CGGCACCGAG TCGCCGCCCG GCGGCGCGGT 
CGGGTGAGCG CCTGA 

 

Protein sequence

MRRFPWITAS VLALAVGAYL VPSIGELLIL DRARVAAGEW WRLLTGSVVH FSASHLGADA 
LAFGIAGALL ERRGRATFAA LTLASALAVG LAVLWLEPSL ERYAGLSGVA YAAIVALALA 
GQRDPGTMAT LSRIALVACV AKLAWELSTG RMLLAGAPPG VVAVPLAHLA GAITAVAVSG 
MKRRGGTALL RHRVAARRRG RVSA