| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AnaeK_0737 |
|---|
| Symbol | |
|---|
| ID | 6786756 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. K |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011145 |
|---|
| Strand | - |
|---|
| Start bp | 842793 |
|---|
| End bp | 843059 |
|---|
| Gene Length | 267 bp |
|---|
| Protein Length | 88 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 642762191 |
|---|
| Product | type III secretion protein, HrpO family |
|---|
| Protein accession | YP_002133105 |
|---|
| Protein GI | 197121154 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4794] Type III secretory pathway, component EscS |
|---|
| TIGRFAM ID | [TIGR01402] flagellar biosynthetic protein FliQ
[TIGR01403] type III secretion protein, HrpO family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0357891 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATCCCG CCCTCCTCCA CCTCGGCCGC GAGGCGCTCC TGCTCGTGCT GGTGCTCTCC
GCCCCGCCGC TCGGCGCCGC GCTCCTCGTC GGCCTCGTCA CCGGCGTGCT CCAGGCCGCC
ACGCAGGTCC AGGAGCAGAC GCTGGGCGTG GTCCCGCGCC TCGTCGCGGT GGTGATCGTG
CTCGCGATCA CGGCGCCCTG GATCGGCGCC CGCGCGGTGC GGTTCGCCGC CGACTGCTTC
GCCCTCGTGC CCCGGATCGC GCCGTGA
|
|---|
| Protein sequence | MDPALLHLGR EALLLVLVLS APPLGAALLV GLVTGVLQAA TQVQEQTLGV VPRLVAVVIV
LAITAPWIGA RAVRFAADCF ALVPRIAP
|
|---|
| |