Gene Anae109_4404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_4404 
Symbol 
ID5375499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp5152923 
End bp5153669 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content73% 
IMG OID640845932 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001381566 
Protein GI153007241 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTCA GTGACCTGAA GGTGATCGTC ACCGGCGCCG CCCGCGGGAT GGGCGCCCAC 
TTCGCGCGCC GGCTCGCCGA GACGGGCGCC GCGGTGGCGG CGGGCGACGT GGACGAGCCG
GGGCTCGCGG AGCTGCCGGC GGGCGTCCAC CGTCGCCGCC TCGACGTCTC CGACGAGCGC
GACGTGCAGG CGTTCGTCGC CTGGGCGGCG CAGGCGATGG GCGGGCTCAA CGGGCTCGTG
AACAACGCCG GCATCATCCG CGACGGCCTG CTCGTGAGGC GCGACCGCGC CACCGGCGAG
ATCAGCACGC TGCCGCGCGC CGACTGGGAC GCGGTCATCG GAGTGAACCT CACCGGCGCG
ACGCTCATGG TGCGCGAGGT GGCGGCGGCG ATGGCCCGCG CCGGCACGAG GCCGGGCGTC
ATCGTCAACA TGTCCTCCAT CGCGCGCCAC GGGAACCGCG GCCAGTCGAA CTACGTCGCC
GCCAAGGCGG CGCTCGCGGC GAACACGGTC ACCTGGGCGC GCGAGCTCGC GCCCTTCGGG
ATCCGCGTGG CCGCCATCGC CCCAGGCATG ATCGAGACGC CCATGACGCA GGGCATGAAC
CAGAAGGCGC GCGACGCGCT CGTGGCGATG ATCCCGGTCG GCCGCATCGG CGTGCCGGAG
GACGTGTGGA GGGCGCTCCG CTTCATCGTC GAGTGCGACT ACTTCGACGG GCGCTGCGTG
GACGTGGACG GGGGCCTCTC GATGTGA
 
Protein sequence
MELSDLKVIV TGAARGMGAH FARRLAETGA AVAAGDVDEP GLAELPAGVH RRRLDVSDER 
DVQAFVAWAA QAMGGLNGLV NNAGIIRDGL LVRRDRATGE ISTLPRADWD AVIGVNLTGA
TLMVREVAAA MARAGTRPGV IVNMSSIARH GNRGQSNYVA AKAALAANTV TWARELAPFG
IRVAAIAPGM IETPMTQGMN QKARDALVAM IPVGRIGVPE DVWRALRFIV ECDYFDGRCV
DVDGGLSM