Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Anae109_4286 |
Symbol | |
ID | 5375561 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter sp. Fw109-5 |
Kingdom | Bacteria |
Replicon accession | NC_009675 |
Strand | - |
Start bp | 5024985 |
End bp | 5027522 |
Gene Length | 2538 bp |
Protein Length | 845 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640845814 |
Product | RND efflux transporter |
Protein accession | YP_001381448 |
Protein GI | 153007123 |
COG category | [R] General function prediction only |
COG ID | [COG1033] Predicted exporters of the RND superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGACCGT CCGAGCGCTG GGTCCGCTTC GCGGACCGCC ACCGCACCGC CATCCTCGCC GCCTGCGCCG CCGTCGCGGT CGCGGGGTCG GTCGGGACGG TGCGGCTCTA CACCGACCTG CGCCCGGACC TCGCCGAGCT CCTGCCCGAG TCGAGCAAGA GCGCGGTGGA CCTCGAGCAC GTGACCGCTC GGGTGGGCGG GTTCGCCGAG CAGACCGTGA TCCTGTCCGG CGCCGATCCC CTGACGATGC AGCTCTTCGC GGACGATCTC GCCGAGAAGC TGGACGAGGC GCCCGAGGAG CTCGTCCGCT GGGTGGAGTA CCGGGTCGGC GAGATCGTCG ACTTCTACCG GCCGCGGCTG CTGCTCTTCC CGGAGAAGGC CGAGCTGGAG GAGCTGCGAG ACGCGCTCGC CGCGCGGATC GCCTGGGAGC GCGCGAACGA GGCGGGCGCC GCGAACGGCG CCGCGCCGGA CGTCGAGGGG CTCATCGCGC GCCTGGGGGG AGAGCGCAAG GAGCTGATCG GGCGCTTCCG CGATGGTTAC ACGATGGGTG ACGTTCCGGT CCCCGGCAAG CCCGGCGAGA AGATGACGAT CCTCGCCATG ATCGTCCGGC TGGGCTCGAC CCCCGGCGAC TACGGCAAGG TGGCCGCGCT CGACCGGGTC GTCCGCGAGA CGGTGAAGGC GCTCGACCCG AAGAAGTACG CGCCCACGCT GGAGGTGGCC TACGGCGGCT ACGTCACCTC CACGGTGATG GAGCACGACG CGCTCGCGGA GGACCTCGTC TGGGCGACGA TCCTCGTCAT CCTCTCCGTC GCCGCCTCCG TCGCGATCTA CAACCGTACG TGGAAGTCGG TGCCGCTCGT CGGCATCCCG CTGCTCGCCG GCACGTTCGC GACGTTCGGG ATCGCCGAGC TGGTGGTGGG GCACCTCAAC TCCAACACCG CCTTCCTCGG CTCGATCGTC GTCGGCAACG GGATCAACGT CGGGCTCATC CTCTTCGCGC GCTACCTCGA GGAGCGGCGG CGCGGGGCGG GGCCCATCCC GGCCATGCAG ACGGCCGTCG GCGCGACCTG GCTCGCGACG CTCACCGCCG CGCTCGCCGC GGGCGTCGCC TACGCCTCCC TCCTCTCCAC CGACTTCCGC GGCTTCAACC AGTTCGGCCT GATCGGCGGG CTGGGCATGG CGCTCTCGTG GCTGTTCTCG TACGTCATGA CGCCGCCGCT CGTGCTCGCC TGGGAGCGGC GCTCGCCCAT TCCCCGCGAG GGGCAGCGTC CCTCGCGACC GCTCTTCACC CTCGCGCTCT CGCACGTCGT CGAGCGGTTT CCACGCCTCA CGACGGTGGT CGCGCTCGCC GTGTCGGTCG CGTCGGTCGG GGCCGTCGCG CACTTCGCGG ACGACGCGCT CGAGTACGAC TTCCGGAACC TGCGCGACGT CTCCGCCCTC GCTCCGGGGG GCCCGGGCTG GTGGGACGCG CGCGTGGACG ATCTCTTCGG CGAGCACCTC ACCCCGACCG CGCTGCTCGC CCGGGACGAG GCGCAGGCGC GCGAGCTGGC GCGCCGCATC GAGGCGCACC GCCGCGCCAC CCCGGGGAGC ACCATCGGCT CGGTGGTCTC GGTCGAGGCG TTCGTGCCCG CCGGGCAGGA GGAGAAGCTC CCGATCGTCC GCGAGATCCG CGCGCTCGCC ACGCGGGAGA ACCTGTCGTT CCTGCCGCCC GACCGGCGGA TGGCAGTCGA GGCCGTGCTC CCGCCCGAGG ACCTGCGGCC GTTCGCGGCG GCGGACCTGC CCGAGGAGCT CCGCCGACAG CTCACCGAGA CGGACGGGCG GGTGGGGACG CCGGTGCTCG TCTACCCGTC GGGGAGGATC GACGTGTGGA ACGGCCGGGA CGTGCTGCGC TTCACCGAGG AGCTCCGCGG GCTCGACCTG CCGGCCGACG CTCCGATCGC GAGCTCGCTC ATGGTCTTCT CGGACGTGCT CTACGCGATC CAGGCGGACG GGCCGCGGGC CACGCTCCTC TCGCTCGCGG GGGTCGTCGT GCTGGTGCTC GTCGCCTTCG GCGCGGGCAA GCGGTCGGTG CGGTCCCTCG CCGACGCGGG CTGGGTGCTC GCCGCGCTCG GTCTCGGCGT GCTCTGGTTC GCGGGCCTCG CGGGCGCGTT CGAGCTGCGG CTCAACATGT TGAACTTCAT CGCCCTGCCG ATCACCTTCG GCATCGGCGT GGACTACGCC ACGAACGTGT TCCAGCGGCG CCGCCTCGAC CACGCGCGCT CCATCTCGGA CACCCTGCGG ACGACCGGCG GCGCCGTGGC GCTCTGCTCC GTGACGACGG TCATCGGCTA CGCGTCCCTG CTCGTGGCTC GCAACCAGGC GCTCTTCTCG TTCGGCCTGC TCGCCGTCAT CGGCGAGCTC GCCTGCCTCG CGACGGCGCT CCTCGCGCTC CCCAGCGTGC TCCGCTGGAG GGAGCAGCGC CGGCGGGAGG GCCCGGGCGC GAACGGCGGT CCCGCGGAGC GCGAGGAGGG CGACGTGGAG CTGAGGGCGG TGCGCTGA
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Protein sequence | MRPSERWVRF ADRHRTAILA ACAAVAVAGS VGTVRLYTDL RPDLAELLPE SSKSAVDLEH VTARVGGFAE QTVILSGADP LTMQLFADDL AEKLDEAPEE LVRWVEYRVG EIVDFYRPRL LLFPEKAELE ELRDALAARI AWERANEAGA ANGAAPDVEG LIARLGGERK ELIGRFRDGY TMGDVPVPGK PGEKMTILAM IVRLGSTPGD YGKVAALDRV VRETVKALDP KKYAPTLEVA YGGYVTSTVM EHDALAEDLV WATILVILSV AASVAIYNRT WKSVPLVGIP LLAGTFATFG IAELVVGHLN SNTAFLGSIV VGNGINVGLI LFARYLEERR RGAGPIPAMQ TAVGATWLAT LTAALAAGVA YASLLSTDFR GFNQFGLIGG LGMALSWLFS YVMTPPLVLA WERRSPIPRE GQRPSRPLFT LALSHVVERF PRLTTVVALA VSVASVGAVA HFADDALEYD FRNLRDVSAL APGGPGWWDA RVDDLFGEHL TPTALLARDE AQARELARRI EAHRRATPGS TIGSVVSVEA FVPAGQEEKL PIVREIRALA TRENLSFLPP DRRMAVEAVL PPEDLRPFAA ADLPEELRRQ LTETDGRVGT PVLVYPSGRI DVWNGRDVLR FTEELRGLDL PADAPIASSL MVFSDVLYAI QADGPRATLL SLAGVVVLVL VAFGAGKRSV RSLADAGWVL AALGLGVLWF AGLAGAFELR LNMLNFIALP ITFGIGVDYA TNVFQRRRLD HARSISDTLR TTGGAVALCS VTTVIGYASL LVARNQALFS FGLLAVIGEL ACLATALLAL PSVLRWREQR RREGPGANGG PAEREEGDVE LRAVR
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