| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Anae109_4286 |
|---|
| Symbol | |
|---|
| ID | 5375561 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. Fw109-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009675 |
|---|
| Strand | - |
|---|
| Start bp | 5024985 |
|---|
| End bp | 5027522 |
|---|
| Gene Length | 2538 bp |
|---|
| Protein Length | 845 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640845814 |
|---|
| Product | RND efflux transporter |
|---|
| Protein accession | YP_001381448 |
|---|
| Protein GI | 153007123 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1033] Predicted exporters of the RND superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGACCGT CCGAGCGCTG GGTCCGCTTC GCGGACCGCC ACCGCACCGC CATCCTCGCC
GCCTGCGCCG CCGTCGCGGT CGCGGGGTCG GTCGGGACGG TGCGGCTCTA CACCGACCTG
CGCCCGGACC TCGCCGAGCT CCTGCCCGAG TCGAGCAAGA GCGCGGTGGA CCTCGAGCAC
GTGACCGCTC GGGTGGGCGG GTTCGCCGAG CAGACCGTGA TCCTGTCCGG CGCCGATCCC
CTGACGATGC AGCTCTTCGC GGACGATCTC GCCGAGAAGC TGGACGAGGC GCCCGAGGAG
CTCGTCCGCT GGGTGGAGTA CCGGGTCGGC GAGATCGTCG ACTTCTACCG GCCGCGGCTG
CTGCTCTTCC CGGAGAAGGC CGAGCTGGAG GAGCTGCGAG ACGCGCTCGC CGCGCGGATC
GCCTGGGAGC GCGCGAACGA GGCGGGCGCC GCGAACGGCG CCGCGCCGGA CGTCGAGGGG
CTCATCGCGC GCCTGGGGGG AGAGCGCAAG GAGCTGATCG GGCGCTTCCG CGATGGTTAC
ACGATGGGTG ACGTTCCGGT CCCCGGCAAG CCCGGCGAGA AGATGACGAT CCTCGCCATG
ATCGTCCGGC TGGGCTCGAC CCCCGGCGAC TACGGCAAGG TGGCCGCGCT CGACCGGGTC
GTCCGCGAGA CGGTGAAGGC GCTCGACCCG AAGAAGTACG CGCCCACGCT GGAGGTGGCC
TACGGCGGCT ACGTCACCTC CACGGTGATG GAGCACGACG CGCTCGCGGA GGACCTCGTC
TGGGCGACGA TCCTCGTCAT CCTCTCCGTC GCCGCCTCCG TCGCGATCTA CAACCGTACG
TGGAAGTCGG TGCCGCTCGT CGGCATCCCG CTGCTCGCCG GCACGTTCGC GACGTTCGGG
ATCGCCGAGC TGGTGGTGGG GCACCTCAAC TCCAACACCG CCTTCCTCGG CTCGATCGTC
GTCGGCAACG GGATCAACGT CGGGCTCATC CTCTTCGCGC GCTACCTCGA GGAGCGGCGG
CGCGGGGCGG GGCCCATCCC GGCCATGCAG ACGGCCGTCG GCGCGACCTG GCTCGCGACG
CTCACCGCCG CGCTCGCCGC GGGCGTCGCC TACGCCTCCC TCCTCTCCAC CGACTTCCGC
GGCTTCAACC AGTTCGGCCT GATCGGCGGG CTGGGCATGG CGCTCTCGTG GCTGTTCTCG
TACGTCATGA CGCCGCCGCT CGTGCTCGCC TGGGAGCGGC GCTCGCCCAT TCCCCGCGAG
GGGCAGCGTC CCTCGCGACC GCTCTTCACC CTCGCGCTCT CGCACGTCGT CGAGCGGTTT
CCACGCCTCA CGACGGTGGT CGCGCTCGCC GTGTCGGTCG CGTCGGTCGG GGCCGTCGCG
CACTTCGCGG ACGACGCGCT CGAGTACGAC TTCCGGAACC TGCGCGACGT CTCCGCCCTC
GCTCCGGGGG GCCCGGGCTG GTGGGACGCG CGCGTGGACG ATCTCTTCGG CGAGCACCTC
ACCCCGACCG CGCTGCTCGC CCGGGACGAG GCGCAGGCGC GCGAGCTGGC GCGCCGCATC
GAGGCGCACC GCCGCGCCAC CCCGGGGAGC ACCATCGGCT CGGTGGTCTC GGTCGAGGCG
TTCGTGCCCG CCGGGCAGGA GGAGAAGCTC CCGATCGTCC GCGAGATCCG CGCGCTCGCC
ACGCGGGAGA ACCTGTCGTT CCTGCCGCCC GACCGGCGGA TGGCAGTCGA GGCCGTGCTC
CCGCCCGAGG ACCTGCGGCC GTTCGCGGCG GCGGACCTGC CCGAGGAGCT CCGCCGACAG
CTCACCGAGA CGGACGGGCG GGTGGGGACG CCGGTGCTCG TCTACCCGTC GGGGAGGATC
GACGTGTGGA ACGGCCGGGA CGTGCTGCGC TTCACCGAGG AGCTCCGCGG GCTCGACCTG
CCGGCCGACG CTCCGATCGC GAGCTCGCTC ATGGTCTTCT CGGACGTGCT CTACGCGATC
CAGGCGGACG GGCCGCGGGC CACGCTCCTC TCGCTCGCGG GGGTCGTCGT GCTGGTGCTC
GTCGCCTTCG GCGCGGGCAA GCGGTCGGTG CGGTCCCTCG CCGACGCGGG CTGGGTGCTC
GCCGCGCTCG GTCTCGGCGT GCTCTGGTTC GCGGGCCTCG CGGGCGCGTT CGAGCTGCGG
CTCAACATGT TGAACTTCAT CGCCCTGCCG ATCACCTTCG GCATCGGCGT GGACTACGCC
ACGAACGTGT TCCAGCGGCG CCGCCTCGAC CACGCGCGCT CCATCTCGGA CACCCTGCGG
ACGACCGGCG GCGCCGTGGC GCTCTGCTCC GTGACGACGG TCATCGGCTA CGCGTCCCTG
CTCGTGGCTC GCAACCAGGC GCTCTTCTCG TTCGGCCTGC TCGCCGTCAT CGGCGAGCTC
GCCTGCCTCG CGACGGCGCT CCTCGCGCTC CCCAGCGTGC TCCGCTGGAG GGAGCAGCGC
CGGCGGGAGG GCCCGGGCGC GAACGGCGGT CCCGCGGAGC GCGAGGAGGG CGACGTGGAG
CTGAGGGCGG TGCGCTGA
|
|---|
| Protein sequence | MRPSERWVRF ADRHRTAILA ACAAVAVAGS VGTVRLYTDL RPDLAELLPE SSKSAVDLEH
VTARVGGFAE QTVILSGADP LTMQLFADDL AEKLDEAPEE LVRWVEYRVG EIVDFYRPRL
LLFPEKAELE ELRDALAARI AWERANEAGA ANGAAPDVEG LIARLGGERK ELIGRFRDGY
TMGDVPVPGK PGEKMTILAM IVRLGSTPGD YGKVAALDRV VRETVKALDP KKYAPTLEVA
YGGYVTSTVM EHDALAEDLV WATILVILSV AASVAIYNRT WKSVPLVGIP LLAGTFATFG
IAELVVGHLN SNTAFLGSIV VGNGINVGLI LFARYLEERR RGAGPIPAMQ TAVGATWLAT
LTAALAAGVA YASLLSTDFR GFNQFGLIGG LGMALSWLFS YVMTPPLVLA WERRSPIPRE
GQRPSRPLFT LALSHVVERF PRLTTVVALA VSVASVGAVA HFADDALEYD FRNLRDVSAL
APGGPGWWDA RVDDLFGEHL TPTALLARDE AQARELARRI EAHRRATPGS TIGSVVSVEA
FVPAGQEEKL PIVREIRALA TRENLSFLPP DRRMAVEAVL PPEDLRPFAA ADLPEELRRQ
LTETDGRVGT PVLVYPSGRI DVWNGRDVLR FTEELRGLDL PADAPIASSL MVFSDVLYAI
QADGPRATLL SLAGVVVLVL VAFGAGKRSV RSLADAGWVL AALGLGVLWF AGLAGAFELR
LNMLNFIALP ITFGIGVDYA TNVFQRRRLD HARSISDTLR TTGGAVALCS VTTVIGYASL
LVARNQALFS FGLLAVIGEL ACLATALLAL PSVLRWREQR RREGPGANGG PAEREEGDVE
LRAVR
|
|---|
| |