Gene Anae109_4163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_4163 
SymbolfadI 
ID5376163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp4882838 
End bp4884145 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content73% 
IMG OID640845690 
Product3-ketoacyl-CoA thiolase 
Protein accessionYP_001381325 
Protein GI153007000 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases
[TIGR02446] fatty oxidation complex, beta subunit FadI 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.310857 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATGT ACGGTTCCGT TCCACCGGGC CGCAGGGCGG CGGTCGTCGC CGGCCTGCGC 
ACGCCGTTCG TCAAGGCGGG TACCGACTTC AAGGACCTCT CCGCCGTCGA GCTCGGCGCG
CTGGTGGTGA ACGAGCTCCT CGCCCGCAGC GGCATCCCGC CGAAGGAGTT CGACTCGGTC
GTGTTCGGGC AGGTGATCCC GTCCCCGACC GTCACGCTGA TCGGCCGCGA GATGGTGCTC
CGCACCCAGC TGCCCCGCAG CGTGCAGGCC CACACCGTCG CCCGTGCGTG CGCGACGTCG
ATCCAGACCA CCACCGACGC CGCCGACCAG ATCCTGCTCG GCCACTCCGA CTGCGCCATC
TCCGGGGGCG CCGAGTCGCT CTCGGACGCG CCCATCTTCG CGACCCGCAC GCTCGCGCAG
GCGCTCGTGG AGGTGTCGCG CGCGAAGACC CTCGCCGATC GCCTACGGAT CCTCTCCGCC
CTCCGGCCCA GGGACTTCAC CCCGCAGCCG CCCGCGCTCA AGGAGCCGAC CACCGGGCTC
ACCATGGGCG AGAGCGCCGA GCTGATGGCG CAGAAGAACG GCATCTCGCG GGAGGCGCAG
GACCGCGTGG CGTACGAGAG CCACCGGCGC GCCGCCGCCG CCTGGGAGAG CGGCAAGTTC
GACGGCGAGG TGATGCACGT CGCCGTGCCC CCGCGCTTCG AGCGGGTGGC CGCGCGCGAC
AACGTCGTGC GGAAGGAGAC CACCCTCGAG GCGCTCGCGG CGCTCAAGCC GGTCTTCGAC
CGGAGGTACG GCACGATCAC CGCGGGGAAC GCCTCCCCGC TCACGGACGG CGCCGCGGCG
CTCGTGCTCA TGAGCGAGGA GAAGGCCTGC GCCCTCGGGC TCCGGCCGCT CGGCTTCGTG
CGCTCCTACG CCTACGCCGC GCTCGATCCC CTCGACCAGC TCCTGCAGGG CCCCGCCTAC
GCCGCGCCGG TGGCGCTCGA CCGCGCCGGG CTCCGCCTCG CCGACATGGA CCTCGTCGAC
ATGCACGAGG CCTTCGCGGC GCAGGTGCTC TCGAACCTGA AGGCGTTCGC CTCGAAGGAC
TTCGCCGAGA ACGAGCTCGG GCGCAAGGAG CCGCTCGGCG AGATCGACCC GGCGAAGCTG
AACGTGAACG GCGGCTCCAT CGCGCTCGGC CACCCGTTCG CGGCGACCGG CGCGCGGATG
ATCCTGCAGA CGCTGCGCGA GCTGGAGCGG CGCCAGGGCC AGCACGCGCT GCTGACGGTG
TGCGCGGCGG GCGCCCTCGG GGCGGCGCTC GTCCTCGAGC GCGAGTGA
 
Protein sequence
MSMYGSVPPG RRAAVVAGLR TPFVKAGTDF KDLSAVELGA LVVNELLARS GIPPKEFDSV 
VFGQVIPSPT VTLIGREMVL RTQLPRSVQA HTVARACATS IQTTTDAADQ ILLGHSDCAI
SGGAESLSDA PIFATRTLAQ ALVEVSRAKT LADRLRILSA LRPRDFTPQP PALKEPTTGL
TMGESAELMA QKNGISREAQ DRVAYESHRR AAAAWESGKF DGEVMHVAVP PRFERVAARD
NVVRKETTLE ALAALKPVFD RRYGTITAGN ASPLTDGAAA LVLMSEEKAC ALGLRPLGFV
RSYAYAALDP LDQLLQGPAY AAPVALDRAG LRLADMDLVD MHEAFAAQVL SNLKAFASKD
FAENELGRKE PLGEIDPAKL NVNGGSIALG HPFAATGARM ILQTLRELER RQGQHALLTV
CAAGALGAAL VLERE