Gene Anae109_3967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_3967 
Symbol 
ID5376010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp4627408 
End bp4628556 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content73% 
IMG OID640845491 
ProductFlp pilus assembly protein ATPase CpaE-like protein 
Protein accessionYP_001381129 
Protein GI153006804 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4963] Flp pilus assembly protein, ATPase CpaE 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.467038 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCAGA TCCCGCTCTA CGTCACGGGC CTCGCGGCGG AAGCCGAAGG GCAGCTCCTC 
TCCGCGCTCG ACGATCTCCC CATCCACAAG GTGGACGCCG AGCCGCGCGC GCTCGCCGAG
CCCGGCAAGC CCGCGATCGC GGTCGTGGGG CTGAACGGCG ATCCGGAGGC GGCGTTTCGC
TCCGTCACCG GGCTCGCCGC GGGCGGCGTG CGCGTGGCGG TGGTCGGCGA CTCGAAGGAT
GCGGATCTCA TCCTCCGCGC GATGCGCAGC GGCGCGCGCG AGTTCGTCGT CGCCGGCGAG
CCCGAGCGGC TGGAGGTGGC GGTGCGCGCG CTCGTGCGTC CAGGGATGGC GAGGACGACG
AGCACGGTCA CGGCCTTCTT CCCCGCGAAG GGCGGCATGG GCGCGACGAC GATCGCCGCC
AACGCCGCAG CTGCGGCCGC GGCGCGGGGC GCGCGGGCGT GCCTCGTCGA TCTCGAGCTG
CAGCTGGGTG ACGCGCTGTC GCTGCTCGAT CTCCAGAGCG CCTACACCGT CTCGGACGTG
CTCGCGAACC TCCGGCGGCT CGACCGCGAG CTGCTCGACA GCTCCGTCGC GAAGCACCGC
GCAGGGATGA GCGTGCTCGC CCAGGGCGAG CGGCTCGACG AGGCCGACAA GATCGACGCT
GCCGCGATCG GCCAGCTCGT CGGATTCCTC CGCCAGCACT ACGGGCACGT CCTCCTCGAT
GGCCTCCACG GGTTCGACGA GCTGTCGCTC GCCGCCCTCG ACGCGGCCGA CCGCGTGGTG
CTGCTCGTGA CGCAGGAGGT CCCTGCGGTG CGCAACGCCC AGCGCGCGGT CGGGATCTTT
CGGAAGCTCG GGTACGAGGA CTCGAAGCTG CTCCTCGTGC TGAACCGCTA TCAACCCCGC
TCCAACGTGA CGCGCGAGGT GATCACCGAG ACCGTCGGAT TGCCCGTGGC GGCGACCGTC
GCGAACGACT TCCCGCTGCT CGCGAACGCG GTCGGACGTG GCGCCACCCT CGCCGAGGTC
GGCCCGCGCG CCGCGATCAC GCGCGACGTC GAGGCGCTCG CGAGCCTGCT CGGCGCGGAG
GACGACTCGG GTGCGACGCG CCGGTCGTGG TGGCGGCGGC TCCTGGGAGG CGCACATGGG
TCTCGGTGA
 
Protein sequence
MDQIPLYVTG LAAEAEGQLL SALDDLPIHK VDAEPRALAE PGKPAIAVVG LNGDPEAAFR 
SVTGLAAGGV RVAVVGDSKD ADLILRAMRS GAREFVVAGE PERLEVAVRA LVRPGMARTT
STVTAFFPAK GGMGATTIAA NAAAAAAARG ARACLVDLEL QLGDALSLLD LQSAYTVSDV
LANLRRLDRE LLDSSVAKHR AGMSVLAQGE RLDEADKIDA AAIGQLVGFL RQHYGHVLLD
GLHGFDELSL AALDAADRVV LLVTQEVPAV RNAQRAVGIF RKLGYEDSKL LLVLNRYQPR
SNVTREVITE TVGLPVAATV ANDFPLLANA VGRGATLAEV GPRAAITRDV EALASLLGAE
DDSGATRRSW WRRLLGGAHG SR