Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Anae109_3801 |
Symbol | |
ID | 5376514 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter sp. Fw109-5 |
Kingdom | Bacteria |
Replicon accession | NC_009675 |
Strand | + |
Start bp | 4430003 |
End bp | 4431586 |
Gene Length | 1584 bp |
Protein Length | 527 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 640845326 |
Product | RNA-binding S1 domain-containing protein |
Protein accession | YP_001380964 |
Protein GI | 153006639 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0539] Ribosomal protein S1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.289517 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.106411 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGAGG AGAAGAAGCC CGAATCCCAG GGCCCGGTGG TGATCCGCAA GGGCCACGTG AAGCCGCCCC CTCCCGGCGC CAAGATCGAG GCGCCGCAGG AGGAGCGGCT CGAGCCCGCT CCGCAGCCCC GCGACGCCCG CCCGCTCTGG CAGCGGGTCG CGGAGGAGCG GTCCGGTGCC GGCCGTGCGG CGCCCTCCGG CGGCCCCGGC GGCCCCGGCG CCCGGCGCGG GCCGCCGCGC GGCGAGCGTC CGCCGCGAGG AAACGATCGC GGCGAGCGCC GCGATCGGCC GCGCGAGGCC CGCGGCCCCG AGGGCGAGCG GCCGCGCCCG CCCCCGCGCG CTCCGGAGCC GCCGCCGGCG CCCGAGGTGG CTGCGCCCGA CGAGGGGTCC TTCGCGGACA TGCTCGCCAC GTCCGAGAGC GGCGCGCCGC GCCGGCGCTT CCAGGTGGGC GAGAAGGTCG CCGGCAAGAT CATCCAGCTC GGCCACGACG TCGCGTTCCT GGAGCTCGGC TCCGGCGTCG CCGAGGCGAT GATCGAGGTC GCGGAGCTGA AGGACGCCGA CGGGAACGTC ACCGCGCGCG AAGGGGACAT CCTGGACGCG GTGGTGATCC ACGCGGACGA CCGCGGCGTC ATCGTCTCGA AGGGACACGC TCGCGCCACG CGCGATCACG CGCGCGAGGC GGTGATCGAG GCGGCCCAGA CCGGGCTGCC GGTGGAGGGG CTCGTCAAGG CCGCGAACAA GGGCGGCCTC GAGGTCGAGG TGCACGGCGT CCGCGCCTTC TGTCCCATGT CGCAGATCGA CGTGCGGTTC GTGGGAGACC CCTCGACGTT CGTCGGCCAG AAGCTCCAGT TCAAGGTGCA GCGCGCCGAC GCGCGCGACT GCGTGCTCTC CCGCCGGGCG CTCCTCGAGG AGGAGCGCGC CGAGAGGGCG CGCGCCACCC GCGAGCGGCT GGCTCCCGGC GCGGTCTTCG ACGGCGTCGT GACGAGCGTG CAGGACTACG GCGCGTTCGT GGACATCGGC GGAGTGGAGG GGCTCGTCCA CGTCTCCGAG CTGTCCTGGG ACCGCGTCTC GAAGCCGCAG GACCTGCTCA CGGCCGGCGA CGCGGTGCAG GTGCAGGTGC TCCGCATCGA CGAGGACCCG AAGAAGGGCG AGCGCATCGG CCTCTCCGTG AAGACCCTCG CGCCGAGGCC CGAGCCGGTG GCGGCTCCGG CGGGCGAGAA GCCGGCCCGC CCTGCCCCGC CTCCGCCGCC GAAGGCGGGG GACGTGGTCG ACGTGTCGGT GGACAAGGTC GAGAGCTTCG GCGTGTTCGT CCGCTTCGCC GGCGGCCGCG GCCTCGTCCC GGCGAGCGAG ACCGGCACGC CGCGCGGCTC CGACCTGCGC AAGTCGTTCA AGGTCGGCGA CGGCTTCCGC GCGCTCGTGC TCGCCATCGA CGAGCAGCAC CGCATCCGCC TGTCGAAGAC CGGCGCCGAG GAGGCCGCGG AGCGCGCCGA GGCGGCGGAC TACATGAAGA AGTCGCCCCG CCCCTCCGGG AAAGGCTTCG GCACGCTCGG CGATCTGCTC CGGCAGAAGC TCGAGAAGAA GTAG
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Protein sequence | MSEEKKPESQ GPVVIRKGHV KPPPPGAKIE APQEERLEPA PQPRDARPLW QRVAEERSGA GRAAPSGGPG GPGARRGPPR GERPPRGNDR GERRDRPREA RGPEGERPRP PPRAPEPPPA PEVAAPDEGS FADMLATSES GAPRRRFQVG EKVAGKIIQL GHDVAFLELG SGVAEAMIEV AELKDADGNV TAREGDILDA VVIHADDRGV IVSKGHARAT RDHAREAVIE AAQTGLPVEG LVKAANKGGL EVEVHGVRAF CPMSQIDVRF VGDPSTFVGQ KLQFKVQRAD ARDCVLSRRA LLEEERAERA RATRERLAPG AVFDGVVTSV QDYGAFVDIG GVEGLVHVSE LSWDRVSKPQ DLLTAGDAVQ VQVLRIDEDP KKGERIGLSV KTLAPRPEPV AAPAGEKPAR PAPPPPPKAG DVVDVSVDKV ESFGVFVRFA GGRGLVPASE TGTPRGSDLR KSFKVGDGFR ALVLAIDEQH RIRLSKTGAE EAAERAEAAD YMKKSPRPSG KGFGTLGDLL RQKLEKK
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