Gene Anae109_3416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_3416 
Symbol 
ID5377880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp4014135 
End bp4014848 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content70% 
IMG OID640844935 
Productputative two-component response-regulatory protein YehT 
Protein accessionYP_001380584 
Protein GI153006259 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3279] Response regulator of the LytR/AlgR family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.329348 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.0577965 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGATGC GCGCGCTGAT CGTGGACGAC GAGCTGCTCC CGCGCGAGGA GCTGGCGCTG 
CTGCTGAAGG CGACGGGGGA GTTCGTGGTG GTGGGGGAGG CCGAGGACGG GGTGGAGGCC
CTCGCGGCGA TCCGGCGCGA GCGTCCCGAC GTCGTGTTCC TCGACGTCAG GATGCCAGGC
GTGAGCGGGT TCGACCTCCT CTCGATGATC GAGGACGAGG TGATGCCGCA GGTGGTGTTC
GTGACCGCGC ACGACGAGTT CGCGATCCGC GCCTTCGACG AGGACGCGGT CGACTACCTG
CTGAAGCCGG TGTCCCCCGA GCGCCTCGCC CGGACGGTCG AGCGGCTGAA GCAGCGCTCC
GCGCCGTCCG GCCGCCCGCC GTTCGCGAGC GCCCCCATCA CGCGCGTCCC GTGCGCGGGC
AAGCGCACCA TCAAGCTGGT CAACGTGACG GACGTCGAGA TCGTCAAGTC GACGATCTCC
GGCGTGTACG TGGTGAGCGG TCAGGGCGAG TTTGGCACCG AGCTGACGCT GCAGGTGCTG
GAGGAGCGCG CCGGGCTCCT GCGGTGCCAC AAGCAGTACC TGGTGAACGC CGCGGCCATC
GACGAGGTCT CCCTCGGCGA CGGCTCGAAC GCGACCATCC GCACCCGCTC GGGACACACG
GTCCCGATCA GCCGCCGCCA CCTCTCCCGC GTCCGCGAGC TGCTGGGGTT CTGA
 
Protein sequence
MMMRALIVDD ELLPREELAL LLKATGEFVV VGEAEDGVEA LAAIRRERPD VVFLDVRMPG 
VSGFDLLSMI EDEVMPQVVF VTAHDEFAIR AFDEDAVDYL LKPVSPERLA RTVERLKQRS
APSGRPPFAS APITRVPCAG KRTIKLVNVT DVEIVKSTIS GVYVVSGQGE FGTELTLQVL
EERAGLLRCH KQYLVNAAAI DEVSLGDGSN ATIRTRSGHT VPISRRHLSR VRELLGF