| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Anae109_3387 |
|---|
| Symbol | |
|---|
| ID | 5375652 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. Fw109-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009675 |
|---|
| Strand | - |
|---|
| Start bp | 3978569 |
|---|
| End bp | 3980518 |
|---|
| Gene Length | 1950 bp |
|---|
| Protein Length | 649 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640844906 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001380555 |
|---|
| Protein GI | 153006230 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCGCC CGACCCGTCG TCCCCTCCTG CCGTCCAAGG GCTGCCTCGC CGTCCTCCTC
GCGGCGCTCG CCGTCGCTCC CGCCGCCCAC GCGCAGCTCG GCATCGATCT GTCCGCGCCG
CCCAAGGAGG AGCGCAAGCC GGCGAAGAAG AAGCCGGCGG CGAAGAAGCC CCCCGTGAAG
AAGCCCGCGG CGAAGAAGCC CGCGCCGGCG AAGCCTCCCG AGCCCGAGTC GCCTCGCGAG
GCGCCGCCGC CGGTCCCGGC GCCCGAGCCG GAGAAGCCGG TCGAGGCGCT CCCGGGCGAG
CCGCCCGAGC AGCCCGCGGC CCAGCCGCAG GAGCTCCCCG GCCTGAAGCT CGCGCCCGTC
GATCCCAAGG CGACGGCGAT CGCGAAGGAG CGCCTCGCCG CGGCGAAGAA GCTCCTCGAC
GAGAAGGCCA CCGAGACCGC CGCCCTCGCG TTCGACCAGA TCCTGCGCGA GCCCACCTTC
GCCGGCGTGC ACGACGAGGC GCGCTACCAG CGCGCGAAGG CGCTCGTGCG GATGGGCCTG
CACCACTCCG CGCTCGCGGC GTTCGACGAG GTCCTCGAGA AGGGGCCGCG CGGCTCGCGC
TTCTACCACT CCGCGATGGA GTGGGTGTTC CACGTCGGAC GGAAGCTCAA GAACGAGCAG
CCGGTGCTGA ACCGGGTCGC GCGCCACGCG CAGTGGGGCT TCCCGCCGGC GTACGAGGAC
CGCTTCCACT TCCTCCTCGC GAAGTACGAG TTCGAGCGCG GCCGGGCGCT CGCCGACGCC
GGGCGCACCG CCGACGCGAA GTCCGCGTGG GCCGAGGCGC GCCGGCTCGC GTCCATGGTC
CGCCGTGAGG CGGGCGCCAA GCCGCCCGTC TCGCCCGACG CCCCCTCCGC CGGGGACGAC
GCCGGCGACG TCTACGCGAA GGCGCGCTTC GTGGACGGCC TCGTGCTGTT CGCCCAGGGC
GACGATCAGG CCTCGGTCGA GGCGTTCAAG GAGGTCGTGC GCCTCACGAA CCCGAAGCGC
GGCCGCCACC CGGATCCGGA GCTGCGCGAG CTCGCGTTCC TGCAGCTCGC GCGCATCCAC
TACCAGAACC GGCAGAACCG CTACGCCATC TGGTACTACG GGAAGATGCC CTGGGGTGGG
GAGCGCTGGC TCGAGGGGCT GTGGGAGGCC TCGTACGCCC ACTACCGGAT CGCCGACTAC
GAGAAGACGC TCGGCAACCT GCTGACGCTC CAGTCGCCGT ACTTCCAGGA CGAGTACTTC
CCCGAGTCGT ACGTCCTCGA GGCGATCGTC TACTACGAGA ACTGCCGCTA CCCCGAGGCG
CGCCGCGTGC TCGAGTCCTT CTCCCGGCTG TACGAGCCGG TGTACGAGGA GCTCGCGGGG
ATCACCACGC GTCCGCAGAC GCCCGAGGCG TACTTCGAGG TGATCGAGCA GTCGCCGCGC
CAGAAGGGCG GGGCGATCAT GCGGCGCATC CTGAAGGTCG CCTACACCGA CCAGAACATC
CGCCGCCTCG CGGAGTCGAT CCGCGAGATC GAGGACGAGA TGGATCGGGG CATCGGCGGC
CGCCGCCCCG AGTTCCGCGA GTCGGCGCTC GCGAAGGAGC TGCTCGACAA GCTCGGCGCG
GACAAGGCCA CGCTCGTCCA GGAGGCCGGC GCCCGCGCCC GCGGCAAGCT CGAGTACGAG
CGCGACTCCC TGCGCACCCT CCTGGCCCAG TCGCTGCGCA TCCGCATCGA GGTCTCCCGC
AAGGAGCGCG AGGCCCTCGA GGGCGCGCTC GCGCGGGGGA GCCAGGTCGA GGTGGTGCGC
GATCTGAAGT ACTCGACCGC CGTCTCGGAC GAGCACCTGT ACTGGCCCTA CCAGGGCGAG
TTCTGGCGCG ACGAGCTCGG CACCTACTCG TACACCCTCA CGAAGGGCTG CAAGGACCGC
CTGCCGCGGT CCCGCGCGGC GGCCCGGTAA
|
|---|
| Protein sequence | MTRPTRRPLL PSKGCLAVLL AALAVAPAAH AQLGIDLSAP PKEERKPAKK KPAAKKPPVK
KPAAKKPAPA KPPEPESPRE APPPVPAPEP EKPVEALPGE PPEQPAAQPQ ELPGLKLAPV
DPKATAIAKE RLAAAKKLLD EKATETAALA FDQILREPTF AGVHDEARYQ RAKALVRMGL
HHSALAAFDE VLEKGPRGSR FYHSAMEWVF HVGRKLKNEQ PVLNRVARHA QWGFPPAYED
RFHFLLAKYE FERGRALADA GRTADAKSAW AEARRLASMV RREAGAKPPV SPDAPSAGDD
AGDVYAKARF VDGLVLFAQG DDQASVEAFK EVVRLTNPKR GRHPDPELRE LAFLQLARIH
YQNRQNRYAI WYYGKMPWGG ERWLEGLWEA SYAHYRIADY EKTLGNLLTL QSPYFQDEYF
PESYVLEAIV YYENCRYPEA RRVLESFSRL YEPVYEELAG ITTRPQTPEA YFEVIEQSPR
QKGGAIMRRI LKVAYTDQNI RRLAESIREI EDEMDRGIGG RRPEFRESAL AKELLDKLGA
DKATLVQEAG ARARGKLEYE RDSLRTLLAQ SLRIRIEVSR KEREALEGAL ARGSQVEVVR
DLKYSTAVSD EHLYWPYQGE FWRDELGTYS YTLTKGCKDR LPRSRAAAR
|
|---|
| |