Gene Anae109_2907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_2907 
Symbol 
ID5376970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp3359345 
End bp3360544 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content74% 
IMG OID640844435 
ProductD-isomer specific 2-hydroxyacid dehydrogenase NAD-binding 
Protein accessionYP_001380091 
Protein GI153005766 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases 
TIGRFAM ID[TIGR01327] D-3-phosphoglycerate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.290007 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.047662 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGATCC TCGTCGCCGA CGCTTTCCCG ACCGAGCGCC TCGCCGACTT CCAGGCGCTC 
GGGCTCGAGG TCGCGCATCG CCCCGACGTC GCCGTGCAGG AGCTCGCCGC GGCCGCCCGC
GACGCGGCGA TCCTCGTGGT CCGCTCGAAG CAGGTGCAGG CGGACGTCTT CGACGCCGCG
CCCGGCCTCT CCCTCGTGGT CAGGGCCGGC GCCGGCGTGA ACACCATCGA CGTGGCGGCG
GCGTCGCGGC GGGGCGTCTA CGTCGCGAAC TGCCCGGGCC AGAACTCCAT CGCGGTGGCG
GAGCTCGCCA TCGGCCTCGT GGTGGCGCTC GACCGGCGCA TCCCCGACAA CGTCGCGCTC
CTGCGCGCCG GCAAGTGGGA CAAGAAGACG TTCTCCGAGG CGCAGGGGCT CTACGGGCGC
ACGCTGGGCG TCGCCGGCGT CGGGTCCATC GGCCGCGAGG TGGCGCGGCG CGCGCAGGCG
CTCGGGATGC GCGTCGTGGC CTGGTCGCGC TCGCTCGACG ACCGCCAGGC GAAGCTGCTC
GGCGTGGAGC GGGCTCCCGA CCTGGCCGCG CTGGCGCGCG AGTCCGACTT CCTCTCCCTG
CACCTCGCGC TCTCGAAGGA GACGCGGGGC ATCGTCTCGC GCGAGGTGCT CGAGGCGCTG
AGGCCCGGCG CCGCCCTCGT GAACACGGCG CGCGCCGAGA TCGTGGACCA GGCGGCGCTC
CTCGAGCTCG CGCGGGCAGG CCGGCTCCGG GTCGGCACGG ACGTGTTCGC CGGCGAGCCC
GAGAAGGGCA AGGCGGAGTT CGACAGCGAG CTCGCGAAGC TGCCGAACGT GTACGGCACG
CACCACATCG GCGCGTCGAC CGCCCAGGCG CAGGACGCCA TCGCCCGCGA GACCGTGCGG
ATCGTCGAGG CGTTCGTGAA GAGCGGCGAG GTGCCGAGCT GCGTGAACGT GGCGCGGAAG
ACGCCCGCGC GCGCCCGGCT GGTCGTGCGC CACCTCGACA AGGTCGGGGT CCTCGCCAAC
GTGCTCGGCG CGATCCGCGA GGCGGGCATC AACGTCGAGG GGGTCGAGAA CACGATCTTC
GAGCACCACC AGGCGGCGTC GTGCACCATC GACCTCGACG AGCGCCCGCC GGCGCCCCTC
CTCGAGCACC TGCGGACTCG CGTGGGGGAC GTGCTCTTCG TGGGCTCCTT CGACCTGTGA
 
Protein sequence
MKILVADAFP TERLADFQAL GLEVAHRPDV AVQELAAAAR DAAILVVRSK QVQADVFDAA 
PGLSLVVRAG AGVNTIDVAA ASRRGVYVAN CPGQNSIAVA ELAIGLVVAL DRRIPDNVAL
LRAGKWDKKT FSEAQGLYGR TLGVAGVGSI GREVARRAQA LGMRVVAWSR SLDDRQAKLL
GVERAPDLAA LARESDFLSL HLALSKETRG IVSREVLEAL RPGAALVNTA RAEIVDQAAL
LELARAGRLR VGTDVFAGEP EKGKAEFDSE LAKLPNVYGT HHIGASTAQA QDAIARETVR
IVEAFVKSGE VPSCVNVARK TPARARLVVR HLDKVGVLAN VLGAIREAGI NVEGVENTIF
EHHQAASCTI DLDERPPAPL LEHLRTRVGD VLFVGSFDL