| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Anae109_2210 |
|---|
| Symbol | |
|---|
| ID | 5376411 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. Fw109-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009675 |
|---|
| Strand | + |
|---|
| Start bp | 2506822 |
|---|
| End bp | 2508999 |
|---|
| Gene Length | 2178 bp |
|---|
| Protein Length | 725 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 80% |
|---|
| IMG OID | 640843722 |
|---|
| Product | lytic transglycosylase catalytic |
|---|
| Protein accession | YP_001379396 |
|---|
| Protein GI | 153005071 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.847947 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.0413346 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCGCCT TGCTTGCTTT ACTGGGGGTC GCGCCGACCC AGGCCGCGGT ACGTGAGCCG
CTGTGCGCCT GGCTCTCGGG CATCGCGGAG GCCGCGCAGG CGCAGGCGGA CGGCGACGCC
GCGGCGGCGG AGATCGCGGC ACGACGGGCG CTCGGCGCAC GCCCGCGCGG TGCCGCGGCG
GGGCGTGCTT CGGCGGCGCT GGGGCTCGCC CTGGCCGGCC GTGGCGCGAA CGCGGAGGCC
GCCGAGACCC TCGAGACCGC CCTCGCGGGG GCGACGCAAT CCGCCCGCGC CCACCTCGCC
CTGGCGCGCG CCGAGGCGCT GCTCTCCTCC GGGGACGCGC CGCGGGCGGC CAAGCTCTTC
GGAGACGTGG CGGTTTCCGG CGATCTCGCG GTCGCGCGGC GCGCGCGCTG GCGCGAGCCG
GAGGCGCTGC TGGCGGCCGG CCTCGCCCCG GAAGCCGTGC CGCTCCTCGA GGCGCTCCTG
CGCGACCAGC CGGCCGACGG CGCCGCGCCC GCCGCGCGGC TGGCGCTCGC GCGCGGCCTG
CGCGAGCTCG GCGAGGACGT CCGCGCGGCC GAGGTGTATC GGTCGCTGTG GCTCGAGCGG
CCGGAGCTGC CGCAGGGGCG CGCCGCGGGC GGCGCTCTCG AGACGTGGCG CGCCGCCGCA
GGTCCCGTCC CCCCTGCGAC CGCGGCCGAG CAGCTCGCGC GCGCGGACCG CCTCCTCGCC
ACGGGGTGGC CCGACGAGGC GCTCCTCGCG CTGGACGCGG CCGAGCACGC GGATCCTCCC
CCTGCCCCCG AGCGCGCCGC AGTGCTGCGC GCGGGAGCGC TCGTCGCGCT CGGTCGCTTC
GAGGAGGCCC GGCGGCTCGC CGCGCCGCTC ACCGGGGCGA CGGACGAGAG CGACCGTCGC
GGCGCGCTGC TCGTGCTCGC GCGCGTGGCG GCGAGGGCGG CGCGCGTGGA CGAGGCGAGC
CGCCTCTACG GCGAGCTGGC GGCGCTCCGG GCGCCCGTCC CGGGCCTCCC GGGGTGGCGG
CAGCGCGACC TCGGCGACGA GGCCGCCTAC CTCGCCGCCT GGCTCCACTA CGATGCCGGG
CGGTACGCGC GCGCCGCGAC GGCGCTGGAC GCGTTCGCGA AGGCGAACCG CCGCTCGCGC
CGCGCGGACG ACGCGCGCTG GTTCGCGGCG TGGTCGCTGT ACCGTCTCGG GCGCGGAGCC
GCCGCCGCGC GCGCGCTCGC GAAGCTCGAG CGCACGTCGT ACGCGGATGC CGCCGCGTAC
TGGCGCGCGC GCCTCGCCCG CGCGCCGCGC GAGCAGCGGC GCCTGTACCG CGCGGCGATC
GACGCCGGCG GCGACGGCTG GTACGCGCTG CTGGCGCGCG CGCGGCTCAG GGCGCTCGGA
GAGGAGCTCG CGCGGGTGCC GCCGGCGGAC GCGCGCCCCT TGCCCGAGGT GCGCGACCCC
GACGCGGCGG CGCGCCTCGC GGTCGCGGTC GAGCTCCTCG GGCTCGGGCT ACGCACCGAG
GCGCTGGAGG AGCTCTCCGA CCTGGCCCGC TCCTGGCGCA TCCGTCCGGC GGCGCCGGTC
GTCGCGCAGC TCGCCGCGTT CGCGGGCGAC GCGGAGGTCC CGTTCCGCGT GGCCCGGGAT
CACCTCCTGC CCACCCGCCG CACGCTGCGG TGGGCGCACC CCGAGCCCTA CCCCGAGCTC
GTCCCGGCGC GCGCGACCGC CGTGGGCCTC GATCCCTCCC TGCTGCTCGC CGTCATGCGG
CGGGAGTCCG GGTTCCGCCC CCGGATCCGG AGCGGCGCCG GCGCCGAGGG GCTGCTGCAG
CTTCGGCCGG CGACGGCCGA GCGCGTCGCG GCGGTGCTCG GGCTTCCGCC GGGCCTCGGG
GCGCGGCTGG GCGAGCCGGA GGTGAACATC ACCCTCGGCT CGCACTACCT CGGGCTGCTC
CTCGCGCGGT TCGGCGAGCC GGCCCTCGCG GTCGCCGCGT ACAACGCGGG CCCGGCGGCG
GCCGCGGAGT GGGCCCGGTC GCGCGCCGGC ATGCCCCTCG ACGCCTGGGT CGAGTCGATC
CCGTACCGGG AGACGCGCAG CTACGTGAGG ATCGTGCTCA CGGACTGGGA CGTTTATCGG
GCGTTGAGGG GAGACGCGCC CGCGCCCATC GATCCCGCCC GCGTGGTGTC GGCCCCGCGC
GGCGGCGTCG CGTTCTGA
|
|---|
| Protein sequence | MIALLALLGV APTQAAVREP LCAWLSGIAE AAQAQADGDA AAAEIAARRA LGARPRGAAA
GRASAALGLA LAGRGANAEA AETLETALAG ATQSARAHLA LARAEALLSS GDAPRAAKLF
GDVAVSGDLA VARRARWREP EALLAAGLAP EAVPLLEALL RDQPADGAAP AARLALARGL
RELGEDVRAA EVYRSLWLER PELPQGRAAG GALETWRAAA GPVPPATAAE QLARADRLLA
TGWPDEALLA LDAAEHADPP PAPERAAVLR AGALVALGRF EEARRLAAPL TGATDESDRR
GALLVLARVA ARAARVDEAS RLYGELAALR APVPGLPGWR QRDLGDEAAY LAAWLHYDAG
RYARAATALD AFAKANRRSR RADDARWFAA WSLYRLGRGA AAARALAKLE RTSYADAAAY
WRARLARAPR EQRRLYRAAI DAGGDGWYAL LARARLRALG EELARVPPAD ARPLPEVRDP
DAAARLAVAV ELLGLGLRTE ALEELSDLAR SWRIRPAAPV VAQLAAFAGD AEVPFRVARD
HLLPTRRTLR WAHPEPYPEL VPARATAVGL DPSLLLAVMR RESGFRPRIR SGAGAEGLLQ
LRPATAERVA AVLGLPPGLG ARLGEPEVNI TLGSHYLGLL LARFGEPALA VAAYNAGPAA
AAEWARSRAG MPLDAWVESI PYRETRSYVR IVLTDWDVYR ALRGDAPAPI DPARVVSAPR
GGVAF
|
|---|
| |